Correlation Catalog M. tuberculosis H37Rv: Rv3379c - 1-deoxy-D-xylulose 5-phosphate synthase dxs2

<< Rv3378c
Rv3380c >>
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Distribution of gene correlation: Rv3379c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0020c conserved hypothetical protein   -0.47185
Rv2532c hypothetical protein   -0.4593
Rv2840c conserved hypothetical protein   -0.43847
Rv0530 conserved hypothetical protein   -0.43473
Rv0659c conserved hypothetical protein   -0.43431
Rv0018c serine/threonine phosphatase ppp   -0.42569
Rv2753c dihydrodipicolinate synthase dapA   -0.42286
Rv0632c enoyl-CoA hydratase echA3   -0.42253
Rv2110c proteasome beta subunit prcB   -0.41565
Rv1480 conserved hypothetical protein   -0.41495
Rv2112c conserved hypothetical protein   -0.4145
Rv1156 conserved hypothetical protein   -0.4071
Rv0722 50S ribosomal protein L30 rpmD   -0.40466
Rv1324 thioredoxin   -0.40386
Rv1340 ribonuclease rphA   -0.40227
Rv3800c polyketide synthase pks13   -0.39826
Rv0910 conserved hypothetical protein   -0.39816
Rv0954 conserved membrane protein   -0.39751
Rv2448c valyl-tRNA synthase protein valS   -0.39647
Rv3028c electron transfer flavoprotein alpha subunit fixB   -0.39054
Rv3802c conserved membrane protein   -0.38991
Rv0542c O-succinylbenzoic acid-CoA ligase menE   -0.38908
Rv1836c conserved hypothetical protein   -0.38907
Rv1344 acyl carrier protein   -0.38781
Rv3648c cold shock protein A cspA   -0.38383
Rv0932c periplasmic phosphate-binding lipoprotein pstS2   -0.38156
Rv0688 ferredoxin reductase   -0.38033
Rv1770 conserved hypothetical protein   -0.37861
Rv1626 two component system transcriptional regulator   -0.37675
Rv1596 nicotinate-nucleotide pyrophosphatase nadC   -0.37642
Rv1446c oxpp cycle protein opcA   -0.37378
Rv3256c conserved hypothetical protein   -0.37276
Rv0005 DNA gyrase subunit B gyrB   -0.37266
Rv3682 bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2   -0.37236
Rv1449c transketolase tkt   -0.36801
Rv0613c hypothetical protein   -0.36218
Rv1642 50S ribosomal protein L35 rpmI   -0.362
Rv2902c ribonuclease HII protein rnhB   -0.36092
Rv1102c conserved hypothetical protein   -0.36071
Rv1610 conserved membrane protein   -0.36044
Rv3208 transcriptional regulator, tetR-family   -0.35934
Rv0734 methionine aminopeptidase mapA   -0.35829
Rv0291 membrane-anchored mycosin mycP3   -0.35722
Rv3420c ribosomal-protein-alanine acetyltransferase rimI   -0.35662
Rv0298 hypothetical protein   -0.35635
Rv0512 delta-aminolevulinic acid dehydratase hemB   -0.35604
Rv3306c amidohydrolase amiB1   -0.35506
Rv0633c hypothetical exported protein   -0.35504
Rv3799c propionyl-CoA carboxylase beta chain 4 accD4   -0.35463
Rv0192 conserved hypothetical protein   -0.35331
Rv0164 conserved hypothetical protein   -0.35261
Rv2788 transcriptional repressor sirR   -0.35186
Rv2051c polyprenol-monophosphomannose synthase ppm1   -0.35146
Rv0952 succinyl-CoA synthetase alpha chain sucD   -0.35095
Rv2901c conserved hypothetical protein   -0.35091
Rv0660c conserved hypothetical protein   -0.35081
Rv0931c transmembrane serine/threonine-protein kinase D pknD   -0.34878
Rv3774 enoyl-CoA hydratase echA21   -0.34798
Rv2537c 3-dehydroquinate dehydratase aroD   -0.34736
Rv2162c PE-PGRS family protein   -0.34647
Rv0410c serine/threonine-protein kinase pknG   -0.34642
Rv3042c phosphoserine phosphatase serB2   -0.34633
Rv2157c UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase murF   -0.34627
Rv0724 protease IV sppA   -0.34595
Rv1332 transcriptional regulator   -0.34506
Rv2868c 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE   -0.34457
Rv2682c 1-deoxy-D-xylulose 5-phosphate synthase dxs1   -0.34355
Rv3878 conserved alanine rich protein   -0.34299
Rv0865 molybdopterin biosynthesis protein mog   -0.34291
Rv0445c alternative RNA polymerase sigma factor sigK   -0.34284
Rv0239 conserved hypothetical protein   -0.34212
Rv1906c conserved hypothetical protein   -0.34181
Rv0367c hypothetical protein   -0.34126
Rv2470 oxygen-binding protein globin glbO   -0.34118
Rv3876 conserved alanine and proline rich protein   -0.34099
Rv2613c conserved hypothetical protein   -0.34052
Rv1304 ATP synthase A chain atpB   -0.34029
Rv2574 conserved hypothetical protein   -0.3385
Rv2097c conserved hypothetical protein   -0.33814
Rv1060 hypothetical protein   -0.33676
Rv2184c conserved hypothetical protein   -0.33441
Rv0748 conserved hypothetical protein   -0.33403
Rv1328 glycogen phosphorylase glgP   -0.33381
Rv3680 anion transporter ATPase   -0.33368
Rv2138 lipoprotein lppL   -0.33353
Rv2798c conserved hypothetical protein   -0.33294
Rv3801c fatty-acid-CoA ligase fadD32   -0.33271
Rv2152c UDP-N-acetylmuramate-alanine ligase murC   -0.33269
Rv1207 dihydropteroate synthase 2 folP2   -0.33193
Rv1410c aminoglycosides/tetracycline-transport membrane protein   -0.33192
Rv0175 MCE-associated membrane protein   -0.33179
Rv0543c conserved hypothetical protein   -0.33133
Rv1100 conserved hypothetical protein   -0.33055
Rv3244c lipoprotein lpqB   -0.32871
Rv3212 conserved alanine and valine rich protein   -0.32766
Rv0994 molybdopterin biosynthesis protein moeA1   -0.32763
Rv0866 molybdenum cofactor biosynthesis protein E2 moaE2   -0.32726
Rv1494 hypothetical protein   -0.32715
Rv2210c branched-chain amino acid transaminase ilvE   -0.32712
Rv1691 conserved hypothetical protein   -0.32689
Rv0190 conserved hypothetical protein   -0.32677
Rv0558 ubiquinone/menaquinone biosynthesis methyltransferase menH   -0.32563
Rv0434 conserved hypothetical protein   -0.32532
Rv3718c conserved hypothetical protein   -0.32507
Rv1604 inositol-monophosphatase impA   -0.32494
Rv2215 pyruvate dehydrogenase E2 component sucB   -0.32483
Rv0038 conserved hypothetical protein   -0.32459
Rv0484c short-chain type oxidoreductase   -0.32352
Rv1072 conserved membrane protein   -0.32262
Rv1166 lipoprotein lpqW   -0.32233
Rv1300 hypothetical protein hemK   -0.32105
Rv3014c NAD-dependent DNA ligase ligA   -0.32086
Rv2858c aldehyde dehydrogenase aldC   -0.31963
Rv2733c conserved alanine and arginine rich protein   -0.31954
Rv2214c short-chain type dehydrogenase ephD   -0.31899
Rv3672c conserved hypothetical protein   -0.31898
Rv2942 transmembrane transport protein mmpL7   -0.31897
Rv2905 alanine rich lipoprotein lppW   -0.3183
Rv2257c conserved hypothetical protein   -0.31644
Rv3874 10 kda culture filtrate antigen esxB   -0.31628
Rv1411c lipoprotein lprG   -0.31597
Rv2052c conserved hypothetical protein   -0.31589
Rv0568 cytochrome P450 135B1 cyp135B1   -0.3156
Rv1693 conserved hypothetical protein   -0.31448
Rv2444c ribonuclease E rne   -0.31446
Rv1794 conserved hypothetical protein   -0.31408
Rv2936 daunorubicin-dim-transport ATP-binding protein ABC transporter drrA   -0.31318
Rv0296c sulfatase   -0.31292
Rv2614c threonyl-tRNA synthetase thrS   -0.31269
Rv0050 bifunctional penicillin-binding protein ponA1   -0.31179
Rv3258c conserved hypothetical protein   -0.31122
Rv1859 molybdenum-transport ATP-binding protein ABC transporter modC   -0.31088
Rv3816c acyltransferase   -0.31061
Rv2460c ATP-dependent clp protease proteolytic subunit 2 clpP2   -0.30967
Rv1421 conserved hypothetical protein   -0.30959
Rv1837c malate synthase G glcB   -0.30889
Rv1700 conserved hypothetical protein   -0.30869
Rv3610c membrane-bound ell division protein ftsH   -0.30855
Rv1694 cytotoxin|haemolysin tlyA   -0.30824
Rv2883c uridylate kinase pyrH   -0.30795
Rv1382 hypothetical exported protein   -0.30785
Rv3592 conserved hypothetical protein   -0.30697
Rv3050c transcriptional regulator, asnC-family   -0.30693
Rv2064 cobalamin biosynthesis protein cobG   -0.3065
Rv1110 lytB-related protein lytB2   -0.30618
Rv3044 Fe(III)-dicitrate-binding periplasmic lipoprotein fecB   -0.30594
Rv2477c macrolide-transport ATP-binding protein ABC transporter   -0.30572
Rv1844c 6-phosphogluconate dehydrogenase gnd1   -0.30569
Rv3410c inosine-5-monophosphate dehydrogenase guaB3   -0.30552
Rv2881c membrane phosphatidate cytidylyltransferase cdsA   -0.30529
Rv3285 bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain accA3   -0.30492
Rv2916c signal recognition particle protein ffh   -0.30457
Rv3412 conserved hypothetical protein   -0.3043
Rv1002c conserved membrane protein   -0.30422
Rv1447c glucose-6-phosphate 1-dehydrogenase zwf2   -0.30352
Rv2585c conserved lipoprotein   -0.30281
Rv0486 mannosyltransferase   -0.30174
Rv0284 conserved membrane protein   -0.30153

Genes with positive correlation ?

 Categories Enriched ?: L

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3108 hypothetical protein   0.64432
Rv1354c conserved hypothetical protein   0.55022
Rv1504c conserved hypothetical protein   0.55018
Rv3333c hypothetical proline rich protein   0.52804
Rv3112 molybdenum cofactor biosynthesis protein D moaD1   0.52062
Rv0355c PPE family protein   0.52038
Rv1499 hypothetical protein   0.51896
Rv2661c hypothetical protein   0.5184
Rv0397 13E12 repeat family protein   0.51795
Rv0305c PPE family protein   0.51666
Rv0031 transposase   0.50524
Rv3178 conserved hypothetical protein   0.49677
Rv3110 pterin-4-alpha-carbinolamine dehydratase moaB1   0.49491
Rv1503c conserved hypothetical protein   0.4926
Rv1432 dehydrogenase   0.49083
Rv0304c PPE family protein   0.48997
Rv3111 molybdenum cofactor biosynthesis protein C moaC1   0.48912
Rv1777 cytochrome P450 144 cyp144   0.48665
Rv0893c conserved hypothetical protein   0.48627
Rv1490 membrane protein   0.48341
Rv2875 major secreted immunogenic protein mpt70   0.48119
Rv3109 molybdenum cofactor biosynthesis protein A moaA1   0.47707
Rv3359 oxidoreductase   0.47703
Rv3819 hypothetical protein   0.47365
Rv0698 conserved hypothetical protein   0.473
Rv3347c PPE family protein   0.47183
Rv0027 hypothetical protein   0.46544
Rv1707 conserved membrane protein   0.4605
Rv0403c membrane protein mmpS1   0.4599
Rv2961 transposase   0.456
Rv3129 conserved hypothetical protein   0.45327
Rv3845 hypothetical protein   0.45319
Rv3113 phosphatase   0.45303
Rv2819c hypothetical protein   0.44901
Rv0836c hypothetical protein   0.449
Rv0099 fatty-acid-CoA ligase fadD10   0.44738
Rv1150 transposase   0.44488
Rv1735c hypothetical membrane protein   0.4448
Rv0797 transposase   0.44098
Rv0943c monooxygenase   0.4395
Rv0895 conserved hypothetical protein   0.43843
Rv2288 hypothetical protein   0.43758
Rv2643 arsenic-transport membrane protein arsC   0.43689
Rv2000 hypothetical protein   0.43517
Rv3130c conserved hypothetical protein   0.4349
Rv3018c PPE family protein   0.43488
Rv0104 conserved hypothetical protein   0.43208
Rv1137c hypothetical protein   0.43151
Rv0601c two component system sensor kinase   0.42904
Rv2820c hypothetical protein   0.42831
Rv3378c hypothetical protein   0.42568
Rv3082c araC/xylS-family virulence-regulating transcriptional regulator virS   0.42272
Rv2269c hypothetical protein   0.42231
Rv3097c PE-PGRS family protein   0.42146
Rv2089c dipeptidase pepE   0.41998
Rv0573c conserved hypothetical protein   0.41882
Rv0575c oxidoreductase   0.41733
Rv0837c hypothetical protein   0.41672
Rv1734c conserved hypothetical protein   0.4143
Rv2529 hypothetical protein   0.41322
Rv3124 transcriptional regulator   0.41012
Rv1804c conserved hypothetical protein   0.4095
Rv1369c transposase   0.40558
Rv3128c conserved hypothetical protein   0.40438
Rv3425 PPE family protein   0.40405
Rv2330c lipoprotein lppP   0.40356
Rv1031 potassium-transporting ATPase C chain kdpC   0.40066
Rv2253 secreted protein   0.39789
Rv2807 conserved hypothetical protein   0.39779
Rv0331 dehydrogenase/reductase   0.39589
Rv0387c conserved hypothetical protein   0.39416
Rv2716 conserved hypothetical protein   0.39407
Rv2833c sn-glycerol-3-phosphate-binding lipoprotein ugpB   0.39369
Rv3123 hypothetical protein   0.39344
Rv3349c transposase   0.39336
Rv2667 ATP-dependent protease ATP-binding subunit clpC2   0.39301
Rv1039c PPE family protein   0.39101
Rv3714c conserved hypothetical protein   0.38882
Rv3069 conserved membrane protein   0.38713
Rv3121 cytochrome P450 141 cyp141   0.38667
Rv1291c conserved secreted protein   0.38664
Rv2626c conserved hypothetical protein   0.38496
Rv3114 conserved hypothetical protein   0.38454
Rv2999 lipoprotein lppY   0.38434
Rv0375c carbon monoxyde dehydrogenase medium chain   0.3843
Rv0833 PE-PGRS family protein   0.3841
Rv3007c oxidoreductase   0.38322
Rv3743c cation transporter P-type ATPase ctpJ   0.38314
Rv0159c PE family protein   0.38263
Rv3023c transposase   0.38238
Rv0840c proline iminopeptidase pip   0.3818
Rv2823c conserved hypothetical protein   0.38085
Rv3207c conserved hypothetical protein   0.38062
Rv1587c 13E12 repeat family protein   0.379
Rv2624c conserved hypothetical protein   0.37781
Rv1513 conserved hypothetical protein   0.3775
Rv2644c hypothetical protein   0.37377
Rv3521 conserved hypothetical protein   0.37375
Rv2628 hypothetical protein   0.37372
Rv1995 hypothetical protein   0.37268
Rv1572c conserved hypothetical protein   0.37194
Rv1931c transcriptional regulator   0.37191
Rv1733c conserved membrane protein   0.37185
Rv1581c phiRv1 phage protein   0.37178
Rv3532 PPE family protein   0.3707
Rv0008c membrane protein   0.37049
Rv3185 transposase   0.36864
Rv0335c PE family protein   0.36814
Rv2227 conserved hypothetical protein   0.36697
Rv2422 hypothetical protein   0.3669
Rv3191c transposase   0.36585
Rv1199c transposase   0.36455
Rv2639c conserved membrane protein   0.36448
Rv2324 transcriptional regulator, asnC-family   0.36394
Rv1402 primosomal protein N priA   0.3635
Rv2625c conserved alanine and leucine rich membrane protein   0.36228
Rv2601 spermidine synthase speE   0.36183
Rv1897c conserved hypothetical protein   0.36146
Rv3766 hypothetical protein   0.36101
Rv3844 transposase   0.35996
Rv0267 membrane nitrite extrusion protein narU   0.3596
Rv0448c conserved hypothetical protein   0.35949
Rv3115 transposase   0.35948
Rv1675c transcriptional regulator   0.359
Rv1239c magnesium and cobalt transport transmembrane protein corA   0.35873
Rv1739c sulphate-transport transmembrane protein ABC transporter   0.35858
Rv1141c enoyl-CoA hydratase echA11   0.3585
Rv3239c conserved membrane transport protein   0.35822
Rv2107 PE family protein   0.35711
Rv2623 conserved hypothetical protein   0.35641
Rv1029 potassium-transporting ATPase A chain kdpA   0.3561
Rv0090 membrane protein   0.35526
Rv2177c transposase   0.35493
Rv1764 transposase   0.3548
Rv2434c conserved membrane protein   0.35435
Rv3912 hypothetical alanine rich protein   0.35404
Rv0851c short-chain type dehydrogenase/reductase   0.35353
Rv3820c polyketide synthase associated protein papA2   0.35306
Rv2641 cadmium inducible protein cadI   0.3528
Rv1047 transposase   0.35215
Rv2023c hypothetical protein   0.35024
Rv1956 transcriptional regulator   0.3495
Rv0407 F420-dependent glucose-6-phosphate dehydrogenase fgd1   0.34913
Rv0119 fatty-acid-CoA ligase fadD7   0.34861
Rv1949c conserved hypothetical protein   0.34821
Rv3543c acyl-CoA dehydrogenase fadE29   0.34779
Rv0591 MCE-family protein mce2C   0.3476
Rv1946c lipoprotein lppG   0.3471
Rv2813 conserved hypothetical protein   0.34671
Rv1231c membrane protein   0.34647
Rv2787 conserved alanine rich protein   0.34581
Rv2512c transposase   0.34572
Rv1489c   0.34566
Rv2142c hypothetical protein   0.34556
Rv1204c conserved hypothetical protein   0.34406
Rv3187 transposase   0.34397
Rv3577 conserved hypothetical protein   0.34372
Rv2991 conserved hypothetical protein   0.34369
Rv3125c PPE family protein   0.34305
Rv3348 transposase   0.34303
Rv1105 para-nitrobenzyl esterase   0.343
Rv2030c conserved hypothetical protein   0.34084
Rv1969 MCE-family protein mce3D   0.34041
Rv2817c conserved hypothetical protein   0.34001
Rv2873 cell surface lipoprotein mpt83   0.33962
Rv3133c two component system transcriptional regulator devR   0.33948
Rv0602c two component system transcriptional regulator tcrA   0.33892
Rv1170 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase mshB   0.33872
Rv2167c transposase   0.33801
Rv1997 metal cation transporting P-type ATPase ctpF   0.33713
Rv0812 amino acid aminotransferase   0.33705
Rv3177 peroxidase   0.33641
Rv1926c immunogenic protein mpt63   0.33619
Rv1978 conserved hypothetical protein   0.336
Rv1975 conserved hypothetical protein   0.33571
Rv0648 alpha-mannosidase   0.33517
Rv2666 transposase   0.33486
Rv2307c conserved hypothetical protein   0.33369
Rv2893 oxidoreductase   0.33351
Rv2328 PE family protein   0.33324
Rv0032 8-amino-7-oxononanoate synthase bioF2   0.33306
Rv3098c hypothetical protein   0.33268
Rv2479c transposase   0.33251
Rv1873 conserved hypothetical protein   0.33017
Rv1568 adenosylmethionine-8-amino-7-oxononanoate aminotransferase bioA   0.32997
Rv2577 conserved hypothetical protein   0.32961
Rv2031c heat shock protein hspX   0.32879
Rv1516c sugar transferase   0.32854
Rv2515c conserved hypothetical protein   0.32849
Rv2542 conserved hypothetical protein   0.32707
Rv0878c PPE family protein   0.32681
Rv2318 periplasmic sugar-binding lipoprotein uspC   0.32631
Rv0453 PPE family protein   0.32585
Rv3427c transposase   0.32489
Rv3775 lipase lipE   0.32433
Rv3397c phytoene synthase phyA   0.32415
Rv1469 cation transporter P-type ATPase D ctpD   0.32344
Rv1541c lipoprotein lprI   0.32342
Rv0255c cobyric acid synthase cobQ1   0.32112
Rv2014 transposase   0.3199
Rv2679 enoyl-CoA hydratase echA15   0.31954
Rv2317 sugar-transport membrane protein ABC transporter uspB   0.3194
Rv1742 hypothetical protein   0.31906
Rv3517 conserved hypothetical protein   0.31889
Rv3728 conserved membrane protein   0.31885
Rv2355 transposase   0.31834
Rv1961 hypothetical protein   0.31774
Rv2017 transcriptional regulator   0.31736
Rv3467 conserved hypothetical protein   0.31717
Rv1993c conserved hypothetical protein   0.31676
Rv3539 PPE family protein   0.31672
Rv1000   0.31627
Rv3126c hypothetical protein   0.31567
Rv2395 conserved membrane protein   0.31535
Rv1526c glycosyltransferase   0.31515
Rv2329c nitrite extrusion protein 1 narK1   0.31485
Rv2600 conserved membrane protein   0.31405
Rv2972c conserved membrane protein   0.31323
Rv2531c amino acid decarboxylase   0.31281
Rv0592 MCE-family protein mce2D   0.31279
Rv0796 transposase   0.31254
Rv3063 carbon starvation protein A cstA   0.31179
Rv0329c conserved hypothetical protein   0.31172
Rv3134c conserved hypothetical protein   0.31058
Rv0405 membrane bound polyketide synthase pks6   0.31045
Rv1972 MCE-associated membrane protein   0.31028
Rv3131 conserved hypothetical protein   0.30998
Rv0259c conserved hypothetical protein   0.30991
Rv0728c D-3-phosphoglycerate dehydrogenase serA2   0.30929
Rv3637 transposase   0.30876
Rv1756c transposase   0.30859
Rv1089 PE family protein   0.30789
Rv1356c hypothetical protein   0.30763
Rv3475 transposase   0.3065
Rv0449c conserved hypothetical protein   0.30638
Rv1948c hypothetical protein   0.30631
Rv0765c oxidoreductase   0.30623
Rv0767c conserved hypothetical protein   0.30612
Rv2944 transposase   0.30599
Rv2668 exported alanine and valine rich protein   0.3059
Rv0204c conserved membrane protein   0.30516
Rv1985c transcriptional regulator, lysR-family   0.3042
Rv0114 D-alpha,beta-D-heptose-1,7-biphosphate phosphatase gmhB   0.304
Rv1255c transcriptional regulator   0.30391
Rv1238 sugar-transport ATP-binding protein ABC transporter sugC   0.30307
Rv3071 conserved hypothetical protein   0.30233
Rv2032 hypothetical protein acg   0.30213
Rv3387 transposase   0.30124
Rv2016 hypothetical protein   0.30121
Rv0327c cytochrome P450 135A1 cyp135A1   0.30086
Rv2723 conserved membrane protein   0.30006