Correlation Catalog M. tuberculosis H37Rv: Rv3911 - alternative RNA polymerase sigma factor sigM

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Distribution of gene correlation: Rv3911 vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: J

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0907 conserved hypothetical protein   -0.38473
Rv1438 triosephosphate isomerase tpi   -0.37866
Rv1476 membrane protein   -0.37768
Rv0760c conserved hypothetical protein   -0.37603
Rv2614c threonyl-tRNA synthetase thrS   -0.3735
Rv1474c transcriptional regulator   -0.36996
Rv0954 conserved membrane protein   -0.35576
Rv2992c glutamyl-tRNA synthetase gltS   -0.34634
Rv3024c tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU   -0.34626
Rv0734 methionine aminopeptidase mapA   -0.34417
Rv0778 cytochrome P450 126 cyp126   -0.34192
Rv0058 replicative DNA helicase dnaB   -0.33939
Rv2882c ribosome recycling factor frr   -0.33859
Rv1304 ATP synthase A chain atpB   -0.33674
Rv0462 dihydrolipoamide dehydrogenase lpd   -0.33581
Rv1328 glycogen phosphorylase glgP   -0.3298
Rv2198c membrane protein mmpS3   -0.32146
Rv0056 50S ribosomal protein L9 rplI   -0.32134
Rv1610 conserved membrane protein   -0.32052
Rv1480 conserved hypothetical protein   -0.31846
Rv1508c membrane protein   -0.31746
Rv0722 50S ribosomal protein L30 rpmD   -0.31251
Rv0103c cation-transporter P-type ATPase B ctpB   -0.31059
Rv2572c aspartyl-tRNA synthetase aspS   -0.31025
Rv2112c conserved hypothetical protein   -0.31016
Rv1836c conserved hypothetical protein   -0.30805
Rv1704c D-serine/alanine/glycine transporter protein cycA   -0.30724
Rv0733 adenylate kinase adk   -0.30688
Rv1078 proline-rich antigen pra   -0.30506
Rv2402 conserved hypothetical protein   -0.30479
Rv1306 ATP synthase B chain atpF   -0.30208
Rv1514c conserved hypothetical protein   -0.30122
Rv1449c transketolase tkt   -0.30109
Rv3148 NADH dehydrogenase I chain D nuoD   -0.30082
Rv3028c electron transfer flavoprotein alpha subunit fixB   -0.30045

Genes with positive correlation ?

 Categories Enriched ?: L

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2709 conserved membrane protein   0.3936
Rv0279c PE-PGRS family protein   0.39064
Rv2647 hypothetical protein   0.38108
Rv0259c conserved hypothetical protein   0.37862
Rv2307c conserved hypothetical protein   0.37129
Rv1561 conserved hypothetical protein   0.36972
Rv2669 conserved hypothetical protein   0.36919
Rv2656c phiRv2 phage protein   0.36781
Rv3183 transcriptional regulator   0.36667
Rv1395 transcriptional regulator   0.36526
Rv3123 hypothetical protein   0.36493
Rv0403c membrane protein mmpS1   0.36057
Rv3475 transposase   0.36035
Rv0232 transcriptional regulator, tetR/acrR-family   0.35928
Rv1187 pyrroline-5-carboxylate dehydrogenase rocA   0.35826
Rv2662 hypothetical protein   0.35739
Rv0657c conserved hypothetical protein   0.35245
Rv0833 PE-PGRS family protein   0.35151
Rv0027 hypothetical protein   0.34915
Rv2306c   0.34642
Rv0335c PE family protein   0.34079
Rv3180c hypothetical alanine rich protein   0.34043
Rv3333c hypothetical proline rich protein   0.34034
Rv3189 conserved hypothetical protein   0.33905
Rv2323c conserved hypothetical protein   0.33857
Rv3539 PPE family protein   0.33667
Rv0841c   0.33412
Rv1365c anti-anti-sigma factor rsfA   0.33386
Rv2517c hypothetical protein   0.33329
Rv3907c poly(A) polymerase pcnA   0.33281
Rv2655c phiRv2 phage protein   0.33212
Rv2358 transcriptional regulator, arsR-family   0.33204
Rv3426 PPE family protein   0.33129
Rv2177c transposase   0.32912
Rv1225c conserved hypothetical protein   0.32712
Rv2663 hypothetical protein   0.32494
Rv0689c hypothetical protein   0.32314
Rv0767c conserved hypothetical protein   0.32179
Rv2657c phiRv2 phage protein   0.32178
Rv3857c membrane protein   0.32173
Rv1997 metal cation transporting P-type ATPase ctpF   0.32132
Rv1975 conserved hypothetical protein   0.32001
Rv0471c hypothetical protein   0.31876
Rv2353c PPE family protein   0.31744
Rv1581c phiRv1 phage protein   0.31197
Rv1041c transposase   0.31161
Rv2355 transposase   0.31151
Rv1429 conserved hypothetical protein   0.31151
Rv3695 conserved membrane protein   0.31132
Rv3357 conserved hypothetical protein   0.3105
Rv3115 transposase   0.30972
Rv3185 transposase   0.30902
Rv1929c conserved hypothetical protein   0.30879
Rv0627 conserved hypothetical protein   0.30848
Rv3533c PPE family protein   0.30811
Rv0275c transcriptional regulator, tetR-family   0.30766
Rv2167c transposase   0.30747
Rv1375 conserved hypothetical protein   0.30741
Rv0607 hypothetical protein   0.30734
Rv2142c hypothetical protein   0.30721
Rv2295 conserved hypothetical protein   0.30719
Rv2827c hypothetical protein   0.30639
Rv3182 conserved hypothetical protein   0.30627
Rv3743c cation transporter P-type ATPase ctpJ   0.30547
Rv2601 spermidine synthase speE   0.30465
Rv1775 conserved hypothetical protein   0.30405
Rv0624 conserved hypothetical protein   0.30357
Rv1584c phiRv1 phage protein   0.30259
Rv1039c PPE family protein   0.30205
Rv2472 conserved hypothetical protein   0.3012
Rv2653c phiRv2 phage protein   0.30099
Rv3521 conserved hypothetical protein   0.30036
Rv2635 hypothetical protein   0.30014