Correlation Catalog M. tuberculosis H37Rv: Rv3711c - DNA polymerase III epsilon subunit dnaQ

<< Rv3710
Rv3712 >>
Click on the question marks for explanations Hide help
Distribution of gene correlation: Rv3711c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: J E

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2940c multifunctional mycocerosic acid synthase membrane-associated mas   -0.44471
Rv3102c cell division ATP-binding protein ftsE   -0.44356
Rv2421c nicotinate-nucleotide adenylyltransferase nadD   -0.43785
Rv0466 conserved hypothetical protein   -0.41528
Rv2930 fatty-acid-CoA ligase fadD26   -0.41476
Rv3002c acetolactate synthase small subunit ilvN   -0.40495
Rv3001c ketol-acid reductoisomerase ilvC   -0.4006
Rv2837c conserved hypothetical protein   -0.39931
Rv0467 isocitrate lyase icl   -0.3967
Rv3003c acetolactate synthase large subunit ilvB1   -0.39369
Rv3580c cysteinyl-tRNA synthetase 1 cysS1   -0.38773
Rv1707 conserved membrane protein   -0.38267
Rv2000 hypothetical protein   -0.38072
Rv2833c sn-glycerol-3-phosphate-binding lipoprotein ugpB   -0.37885
Rv2768c PPE family protein   -0.37726
Rv2959c methyltransferase/methylase   -0.37521
Rv2542 conserved hypothetical protein   -0.37324
Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase aroA   -0.37271
Rv1589 biotin synthetase bioB   -0.37022
Rv2329c nitrite extrusion protein 1 narK1   -0.3664
Rv2838c ribosome-binding factor A rbfA   -0.36458
Rv3771c conserved hypothetical protein   -0.36348
Rv2962c glycosyltransferase   -0.35839
Rv3862c transcriptional regulator whiB-like whiB6   -0.35775
Rv3013 conserved hypothetical protein   -0.35729
Rv3405c transcriptional regulator   -0.35563
Rv1901 competence damage-inducible protein A cinA   -0.35558
Rv2433c hypothetical protein   -0.35552
Rv1014c peptidyl-tRNA hydrolase pth   -0.3555
Rv1015c 50S ribosomal protein L25 rplY   -0.35474
Rv1778c hypothetical protein   -0.35242
Rv2843 conserved alanine rich membrane protein   -0.35152
Rv3218 conserved hypothetical protein   -0.3503
Rv2937 daunorubicin-dim-transport membrane protein ABC transporter drrB   -0.34874
Rv3442c 30S ribosomal protein S9 rpsI   -0.34756
Rv1951c conserved hypothetical protein   -0.34637
Rv2122c phosphoribosyl-AMP pyrophosphatase hisE   -0.34552
Rv2931 phenolpthiocerol synthesis type-I polyketide synthase ppsA   -0.34523
Rv2887 transcriptional regulator   -0.3444
Rv2450c resuscitation-promoting factor rpfE   -0.34232
Rv1779c hypothetical membrane protein   -0.34226
Rv1299 peptide chain release factor 1 prfA   -0.34042
Rv2699c conserved hypothetical protein   -0.34014
Rv2862c conserved hypothetical protein   -0.3391
Rv2908c conserved hypothetical protein   -0.33867
Rv1259 conserved hypothetical protein   -0.33864
Rv2172c conserved hypothetical protein   -0.33828
Rv2704 conserved hypothetical protein   -0.33815
Rv2067c conserved hypothetical protein   -0.33676
Rv1194c conserved hypothetical protein   -0.33645
Rv3135 PPE family protein   -0.33632
Rv3924c 50S ribosomal protein L34 rpmH   -0.33632
Rv0917 glycine betaine transport membrane protein betP   -0.3357
Rv2212 conserved hypothetical protein   -0.33538
Rv3797 acyl-CoA dehydrogenase fadE35   -0.33507
Rv2439c glutamate 5-kinase protein proB   -0.33451
Rv1380 aspartate carbamoyltransferase pyrB   -0.33449
Rv3137 monophosphatase   -0.33412
Rv3457c DNA-directed RNA polymerase alpha chain rpoA   -0.33311
Rv1168c PPE family protein   -0.33176
Rv0723 50S ribosomal protein L15 rplO   -0.33129
Rv0720 50S ribosomal protein L18 rplR   -0.33112
Rv0716 50S ribosomal protein L5 rplE   -0.33063
Rv1009 resuscitation-promoting factor rpfB   -0.33057
Rv2523c holo-[acyl-carrier protein] synthase acpS   -0.33031
Rv1483 3-oxoacyl-[acyl-carrier protein] reductase fabG1   -0.33002
Rv2645 hypothetical protein   -0.3291
Rv1143 alpha-methylacyl-CoA racemase mcr   -0.32903
Rv0203 hypothetical exported protein   -0.32847
Rv2522c conserved hypothetical protein   -0.32843
Rv2211c aminomethyltransferase gcvT   -0.32785
Rv3455c tRNA pseudouridine synthase A truA   -0.32696
Rv2141c conserved hypothetical protein   -0.3268
Rv0390 conserved hypothetical protein   -0.32592
Rv0476 conserved membrane protein   -0.32571
Rv3896c conserved hypothetical protein   -0.32523
Rv0535 5-methylthioadenosine phosphorylase pnp   -0.32458
Rv1647 conserved hypothetical protein   -0.32451
Rv1178 aminotransferase   -0.32359
Rv3425 PPE family protein   -0.3232
Rv3923c ribonuclease P protein component rnpA   -0.32316
Rv2932 phenolpthiocerol synthesis type-I polyketide synthase ppsB   -0.32283
Rv2213 aminopeptidase pepB   -0.32252
Rv3658c conserved membrane protein   -0.32143
Rv0707 30S ribosomal protein S3 rpsC   -0.32105
Rv1850 urease alpha subunit ureC   -0.32
Rv2431c PE family protein   -0.31901
Rv3027c conserved hypothetical protein   -0.31799
Rv3506 fatty-acid-CoA synthetase fadD17   -0.31719
Rv0814c hypothetical protein sseC2   -0.31671
Rv0683 30S ribosomal protein S7 rpsG   -0.31632
Rv2478c conserved hypothetical protein   -0.31629
Rv0668 DNA-directed RNA polymerase beta chain rpoC   -0.31617
Rv0705 30S ribosomal protein S19 rpsS   -0.31574
Rv2726c diaminopimelate epimerase dapF   -0.31445
Rv3820c polyketide synthase associated protein papA2   -0.31382
Rv0701 50S ribosomal protein L3 rplC   -0.31351
Rv0704 50S ribosomal protein L2 rplB   -0.31339
Rv2451 hypothetical proline and serine rich protein   -0.31261
Rv2121c ATP phosphoribosyltransferase hisG   -0.31256
Rv1644 23S rRNA methyltransferase tsnR   -0.312
Rv0718 30S ribosomal protein S8 rpsH   -0.31169
Rv0420c transmembrane protein   -0.31117
Rv3195 conserved hypothetical protein   -0.31097
Rv3443c 50S ribosomal protein L13 rplM   -0.31093
Rv1379 pyrimidine operon regulatory protein pyrR   -0.31022
Rv3636 transposase   -0.31002
Rv1361c PPE family protein   -0.30991
Rv2955c conserved hypothetical protein   -0.3094
Rv2420c conserved hypothetical protein   -0.30906
Rv0881 rRNA methyltransferase   -0.30893
Rv1535 hypothetical protein   -0.30883
Rv2888c amidase amiC   -0.30856
Rv2288 hypothetical protein   -0.30832
Rv3340 O-acetylhomoserine sulfhydrylase metC   -0.30826
Rv0719 50S ribosomal protein L6 rplF   -0.30804
Rv3603c conserved alanine and leucine rich protein   -0.30799
Rv0947c mycolyl transferase   -0.30792
Rv2647 hypothetical protein   -0.30738
Rv2839c translation initiation factor IF-2 infB   -0.30734
Rv3183 transcriptional regulator   -0.3061
Rv2907c 16S rRNA processing protein rimM   -0.30608
Rv0867c resuscitation-promoting factor rpfA   -0.30592
Rv1628c conserved hypothetical protein   -0.30513
Rv0483 lipoprotein lprQ   -0.30472
Rv2909c 30S ribosomal protein S16 rpsP   -0.30395
Rv0721 30S ribosomal protein S5 rpsE   -0.30347
Rv1858 molybdenum-transport membrane protein ABC transporter modB   -0.30278
Rv2700 conserved secreted protein   -0.30278
Rv0731c conserved hypothetical protein   -0.302
Rv3722c conserved hypothetical protein   -0.30178
Rv0480c amidohydrolase   -0.30168
Rv2116 lipoprotein lppK   -0.30148
Rv1807 PPE family protein   -0.30108
Rv2021c transcriptional regulator   -0.30097

Genes with positive correlation ?

 Categories Enriched ?: M T

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3717 conserved hypothetical protein   0.59061
Rv2927c conserved hypothetical protein   0.57598
Rv3209 conserved proline and threonine rich protein   0.50437
Rv2154c cell division protein ftsW   0.48773
Rv2153c UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol-N-acetylglucosamine transferase murG   0.48718
Rv2681 conserved alanine rich protein   0.48431
Rv2151c cell division protein ftsQ   0.4741
Rv0276 conserved hypothetical protein   0.45418
Rv3811 conserved hypothetical protein   0.45338
Rv0598c conserved hypothetical protein   0.45169
Rv1497 esterase lipL   0.43713
Rv3690 conserved membrane protein   0.42707
Rv2525c conserved hypothetical protein   0.42321
Rv3719 conserved hypothetical protein   0.42274
Rv2150c cell division protein ftsZ   0.4205
Rv0659c conserved hypothetical protein   0.41719
Rv2152c UDP-N-acetylmuramate-alanine ligase murC   0.41647
Rv2901c conserved hypothetical protein   0.41406
Rv0724 protease IV sppA   0.41354
Rv2155c UDP-N-acetylmuramoylalanine-D-glutamate ligase murD   0.41344
Rv3689 conserved membrane protein   0.40936
Rv1478 invasion-associated protein   0.40898
Rv0425c metal cation transporting P-type ATPase ctpH   0.40629
Rv3759c osmoprotectant proX   0.40613
Rv2097c conserved hypothetical protein   0.40474
Rv1332 transcriptional regulator   0.40428
Rv2163c penicillin-binding membrane protein pbpB   0.40328
Rv0060 conserved hypothetical protein   0.39994
Rv0868c molybdenum cofactor biosynthesis protein D 2 moaD2   0.399
Rv1434 hypothetical protein   0.39623
Rv3810 exported repetitive protein pirG   0.39499
Rv0883c conserved hypothetical protein   0.3947
Rv3734c conserved hypothetical protein   0.39385
Rv1841c conserved membrane protein   0.39282
Rv0129c secreted fibronectin-binding protein C antigen 85-C fbpC   0.39213
Rv2680 conserved hypothetical protein   0.39106
Rv0975c acyl-CoA dehydrogenase fadE13   0.39048
Rv0490 two component system sensor histidine kinase senX3   0.38704
Rv1625c membrane-anchored adenylyl cyclase cya   0.38506
Rv1770 conserved hypothetical protein   0.3845
Rv1076 lipase lipU   0.38393
Rv2092c ATP-dependent DNA helicase helY   0.38072
Rv2367c hypothetical protein   0.38054
Rv1880c cytochrome P450 140 cyp140   0.37873
Rv3244c lipoprotein lpqB   0.37861
Rv0987 adhesion component transport transmembrane protein ABC transporter   0.37597
Rv1433 hypothetical exported protein   0.37308
Rv0865 molybdopterin biosynthesis protein mog   0.36918
Rv2894c integrase xerC   0.36819
Rv1925 acyl-CoA ligase fadD31   0.36579
Rv3087 conserved hypothetical protein   0.36522
Rv1697 conserved hypothetical protein   0.36263
Rv2507 conserved proline rich membrane protein   0.36224
Rv0961 membrane protein   0.3615
Rv3413c hypothetical alanine and proline rich protein   0.36126
Rv2325c conserved hypothetical protein   0.36119
Rv2149c hypothetical protein yfiH   0.3603
Rv3587c conserved membrane protein   0.3602
Rv3414c alternative RNA polymerase sigma factor sigD   0.35999
Rv2589 4-aminobutyrate aminotransferase gabT   0.35874
Rv2632c conserved hypothetical protein   0.35772
Rv1698 conserved hypothetical protein   0.35704
Rv1882c short-chain type dehydrogenase/reductase   0.35653
Rv0939 bifunctional 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/cyclase/dehydrase   0.35633
Rv0982 two component system sensor kinase mprB   0.35579
Rv1892 membrane protein   0.3543
Rv3330 penicillin-binding protein dacB1   0.3537
Rv0995 ribosomal-protein-alanine acetyltransferase rimJ   0.35311
Rv2364c GTP-binding protein era   0.35171
Rv3760 conserved membrane protein   0.35057
Rv1906c conserved hypothetical protein   0.34906
Rv2567 conserved alanine and leucine rich protein   0.3485
Rv3310 acid phosphatase   0.34824
Rv2147c conserved hypothetical protein   0.34595
Rv1916 isocitrate lyase aceAb   0.34556
Rv3583c transcriptional regulator   0.34188
Rv2135c conserved hypothetical protein   0.34143
Rv0931c transmembrane serine/threonine-protein kinase D pknD   0.33719
Rv1771 oxidoreductase   0.33711
Rv1213 glucose-1-phosphate adenylyltransferase glgC   0.33703
Rv0273c transcriptional regulator   0.33435
Rv3856c conserved hypothetical protein   0.33362
Rv1070c enoyl-CoA hydratase echA8   0.33328
Rv2750 dehydrogenase   0.33326
Rv1987 chitinase   0.33204
Rv0272c hypothetical protein   0.33193
Rv1416 riboflavin synthase beta chain ribH   0.33098
Rv0410c serine/threonine-protein kinase pknG   0.32977
Rv0655 ribonucleotide-transport ATP-binding protein ABC transporter mkl   0.32851
Rv3869 conserved membrane protein   0.3282
Rv1095 phosphate starvation-inducible protein phoH2   0.32816
Rv3246c two component system transcriptional regulator mtrA   0.32708
Rv3312c conserved hypothetical protein   0.32527
Rv1606 phosphoribosyl-AMP-1,6-cyclohydrolase hisI   0.32502
Rv3089 fatty-acid-CoA ligase fadD13   0.32449
Rv3410c inosine-5-monophosphate dehydrogenase guaB3   0.32436
Rv2485c carboxylesterase lipQ   0.32357
Rv2926c conserved hypothetical protein   0.32207
Rv2074 conserved hypothetical protein   0.32173
Rv2242 conserved hypothetical protein   0.32151
Rv1477 invasion-associated protein   0.32117
Rv1632c hypothetical protein   0.32099
Rv2302 conserved hypothetical protein   0.3209
Rv2575 conserved glycine rich membrane protein   0.32074
Rv0763c ferredoxin   0.3206
Rv3699 conserved hypothetical protein   0.31901
Rv1798 conserved hypothetical protein   0.3188
Rv1126c conserved hypothetical protein   0.3188
Rv2165c conserved hypothetical protein   0.31868
Rv3606c 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK   0.31821
Rv3812 PE-PGRS family protein   0.31706
Rv1331 conserved hypothetical protein   0.3167
Rv0108c hypothetical protein   0.31649
Rv1862 alcohol dehydrogenase adhA   0.31615
Rv1157c conserved alanine and proline rich protein   0.31615
Rv2925c ribonuclease III rnc   0.31573
Rv0239 conserved hypothetical protein   0.31542
Rv0168 hypothetical membrane protein yrbE1B   0.31367
Rv2753c dihydrodipicolinate synthase dapA   0.31188
Rv0174 MCE-family protein mce1F   0.31087
Rv3765c two component system transcriptional regulator   0.30963
Rv2137c conserved hypothetical protein   0.30885
Rv3870 conserved membrane protein   0.30835
Rv1334 conserved hypothetical protein   0.30648
Rv0870c conserved membrane protein   0.3062
Rv0856 conserved hypothetical protein   0.30602
Rv1769 conserved hypothetical protein   0.30497
Rv0902c two component system sensor histidine kinase prrB   0.30419
Rv2740 conserved hypothetical protein   0.30286
Rv2362c conserved hypothetical protein   0.30286
Rv2537c 3-dehydroquinate dehydratase aroD   0.30175