Correlation Catalog M. tuberculosis H37Rv: Rv3414c - alternative RNA polymerase sigma factor sigD

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Distribution of gene correlation: Rv3414c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2016 hypothetical protein   -0.39005
Rv2017 transcriptional regulator   -0.35943
Rv1073 conserved hypothetical protein   -0.35205
Rv3017c Esat-6 like protein esxQ   -0.34867
Rv1014c peptidyl-tRNA hydrolase pth   -0.34378
Rv0375c carbon monoxyde dehydrogenase medium chain   -0.34126
Rv1995 hypothetical protein   -0.33906
Rv0607 hypothetical protein   -0.33861
Rv0812 amino acid aminotransferase   -0.33639
Rv2661c hypothetical protein   -0.33303
Rv1802 PPE family protein   -0.33297
Rv0990c hypothetical protein   -0.32806
Rv0465c transcriptional regulator   -0.32639
Rv1673c conserved hypothetical protein   -0.31848
Rv1587c 13E12 repeat family protein   -0.3164
Rv3743c cation transporter P-type ATPase ctpJ   -0.31598
Rv2177c transposase   -0.31484
Rv0081 transcriptional regulator   -0.31294
Rv3467 conserved hypothetical protein   -0.3085
Rv2029c phosphofructokinase pfkB   -0.30831
Rv0453 PPE family protein   -0.30816
Rv2958c glycosyltransferase   -0.30748
Rv1764 transposase   -0.30408
Rv0099 fatty-acid-CoA ligase fadD10   -0.30404
Rv0661c conserved hypothetical protein   -0.30357
Rv2395 conserved membrane protein   -0.3032
Rv0331 dehydrogenase/reductase   -0.30102
Rv0251c heat shock protein hsp   -0.30079

Genes with positive correlation ?

 Categories Enriched ?: M

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3258c conserved hypothetical protein   0.71624
Rv0040c secreted proline rich protein mtc28   0.71074
Rv2525c conserved hypothetical protein   0.66835
Rv1158c conserved alanine and proline rich protein   0.66166
Rv3260c transcriptional regulator whib-like whiB2   0.64805
Rv3413c hypothetical alanine and proline rich protein   0.64356
Rv0129c secreted fibronectin-binding protein C antigen 85-C fbpC   0.63387
Rv3812 PE-PGRS family protein   0.63273
Rv0994 molybdopterin biosynthesis protein moeA1   0.61283
Rv3810 exported repetitive protein pirG   0.61183
Rv1566c invasion-associated protein   0.61123
Rv2155c UDP-N-acetylmuramoylalanine-D-glutamate ligase murD   0.61111
Rv1435c conserved glycine, proline and valine-rich secreted protein   0.60734
Rv1987 chitinase   0.60375
Rv2147c conserved hypothetical protein   0.60086
Rv1830 conserved hypothetical protein   0.59427
Rv3310 acid phosphatase   0.58167
Rv1698 conserved hypothetical protein   0.56215
Rv1477 invasion-associated protein   0.56117
Rv2074 conserved hypothetical protein   0.55818
Rv3005c conserved hypothetical protein   0.55601
Rv3587c conserved membrane protein   0.55466
Rv3717 conserved hypothetical protein   0.54325
Rv2721c conserved alanine and glycine rich membrane protein   0.5345
Rv1157c conserved alanine and proline rich protein   0.53321
Rv0312 conserved proline and threonine rich protein   0.52951
Rv0660c conserved hypothetical protein   0.52826
Rv3330 penicillin-binding protein dacB1   0.52723
Rv2145c hypothetical protein wag31   0.5064
Rv1497 esterase lipL   0.49213
Rv2927c conserved hypothetical protein   0.49134
Rv0179c lipoprotein lprO   0.4886
Rv2154c cell division protein ftsW   0.48626
Rv1754c conserved hypothetical protein   0.47195
Rv2418c hypothetical protein   0.46796
Rv0430 conserved hypothetical protein   0.46609
Rv1697 conserved hypothetical protein   0.46521
Rv2894c integrase xerC   0.4626
Rv0883c conserved hypothetical protein   0.46168
Rv3246c two component system transcriptional regulator mtrA   0.45951
Rv2165c conserved hypothetical protein   0.45356
Rv1690 lipoprotein lprJ   0.4532
Rv0888 hypothetical exported protein   0.44962
Rv2166c conserved hypothetical protein   0.4422
Rv3209 conserved proline and threonine rich protein   0.43951
Rv2150c cell division protein ftsZ   0.42787
Rv2986c histone-like DNA-binding protein hupB   0.42525
Rv0659c conserved hypothetical protein   0.41907
Rv2163c penicillin-binding membrane protein pbpB   0.40955
Rv2144c transmembrane protein   0.4055
Rv3096 conserved hypothetical protein   0.404
Rv0309 hypothetical exported protein   0.39719
Rv1046c hypothetical protein   0.39174
Rv1883c conserved hypothetical protein   0.3904
Rv0910 conserved hypothetical protein   0.38987
Rv1076 lipase lipU   0.38088
Rv2864c penicillin-binding lipoprotein   0.37876
Rv1884c resuscitation-promoting factor rpfC   0.37839
Rv3604c conserved alanine, arginine and proline rich membrane protein   0.37325
Rv2350c membrane-associated phospholipase C 2 plcB   0.37037
Rv2680 conserved hypothetical protein   0.36521
Rv3711c DNA polymerase III epsilon subunit dnaQ   0.35999
Rv3689 conserved membrane protein   0.3594
Rv1220c methyltransferase   0.3568
Rv2882c ribosome recycling factor frr   0.35636
Rv3037c conserved hypothetical protein   0.35609
Rv1036c transposase   0.35536
Rv2138 lipoprotein lppL   0.35243
Rv3208 transcriptional regulator, tetR-family   0.35056
Rv2152c UDP-N-acetylmuramate-alanine ligase murC   0.34948
Rv1632c hypothetical protein   0.34757
Rv1436 glyceraldehyde 3-phosphate dehydrogenase gap   0.34537
Rv2457c ATP-dependent clp protease ATP-binding subunit clpX   0.33839
Rv0108c hypothetical protein   0.33712
Rv2413c conserved hypothetical protein   0.33169
Rv0208c methlytransferase   0.33145
Rv1772 hypothetical protein   0.33005
Rv2681 conserved alanine rich protein   0.3279
Rv2356c PPE family protein   0.32561
Rv3321c conserved hypothetical protein   0.32547
Rv0341 isoniazid inductible gene protein iniB   0.31887
Rv2280 dehydrogenase   0.31795
Rv1693 conserved hypothetical protein   0.31643
Rv1770 conserved hypothetical protein   0.31368
Rv2846c membrane efflux protein efpA   0.31332
Rv0925c conserved hypothetical protein   0.31122
Rv2349c phospholipase C 3 plcC   0.31093
Rv0896 citrate synthase I gltA2   0.3105
Rv3158 NADH dehydrogenase I chain N nuoN   0.31023
Rv1478 invasion-associated protein   0.30663
Rv1872c L-lactate dehydrogenase lldD2   0.30604
Rv2702 polyphosphate glucokinase ppgK   0.30548
Rv2256c conserved hypothetical protein   0.30454
Rv3150 NADH dehydrogenase I chain F nuoF   0.30353
Rv3353c conserved hypothetical protein   0.30055
Rv3142c hypothetical protein   0.30039
Rv0192 conserved hypothetical protein   0.30022