Correlation Catalog M. tuberculosis H37Rv: Rv3408 - conserved hypothetical protein

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Rv3409c >>
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Distribution of gene correlation: Rv3408 vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0871 cold shock protein B cspB   -0.39346
Rv3803c secreted fibronectin-binding protein antigen protein fbpD   -0.38867
Rv1611 indole-3-glycerol phosphate synthase trpC   -0.36375
Rv0315 beta-1,3-glucanase precursor   -0.35711
Rv3363c conserved hypothetical protein   -0.35589
Rv3331 sugar-transport membrane protein sugI   -0.35039
Rv3893c PE family protein   -0.34518
Rv0127 conserved hypothetical protein   -0.3436
Rv3686c conserved hypothetical protein   -0.33733
Rv1567c hypothetical membrane protein   -0.33699
Rv3716c conserved hypothetical protein   -0.33459
Rv0583c lipoprotein lpqN   -0.32439
Rv0643c methoxy mycolic acid synthase 3 mmaA3   -0.32173
Rv3850 conserved hypothetical protein   -0.32053
Rv2445c nucleoside diphosphate kinase ndkA   -0.31975
Rv2387 conserved hypothetical protein   -0.31894
Rv2699c conserved hypothetical protein   -0.31743
Rv2603c conserved hypothetical protein   -0.31429
Rv1617 pyruvate kinase pykA   -0.31318
Rv2908c conserved hypothetical protein   -0.31227
Rv1815 conserved hypothetical protein   -0.31072
Rv3821 conserved membrane protein   -0.30704
Rv3788 hypothetical protein   -0.30549
Rv3726 dehydrogenase   -0.30429
Rv3715c recombination protein recR   -0.30164
Rv2459 conserved membrane transport protein   -0.30003

Genes with positive correlation ?

 Categories Enriched ?: K

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3407 conserved hypothetical protein   0.67297
Rv2710 RNA polymerase sigma factor sigB   0.48223
Rv3066 transcriptional regulator, deoR-family   0.48179
Rv1925 acyl-CoA ligase fadD31   0.46725
Rv2711 iron-dependent repressor and activator ideR   0.44475
Rv2941 fatty-acid-CoA ligase fadD28   0.44196
Rv0724 protease IV sppA   0.43077
Rv2688c antibiotic-transport ATP-binding protein ABC transporter   0.43028
Rv0712 conserved hypothetical protein   0.42801
Rv2527 conserved hypothetical protein   0.42371
Rv3869 conserved membrane protein   0.41847
Rv3173c transcriptional regulator, tetR/acrR-family   0.40925
Rv0563 protease transmembrane protein heat shock protein htpX   0.40608
Rv2496c pyruvate dehydrogenase E1 component beta subunit pdhB   0.40402
Rv0898c conserved hypothetical protein   0.39852
Rv1142c enoyl-CoA hydratase echA10   0.39096
Rv0598c conserved hypothetical protein   0.38788
Rv1982c conserved hypothetical protein   0.38536
Rv3596c ATP-dependent protease ATP-binding subunit clpC1   0.38131
Rv0826 conserved hypothetical protein   0.38097
Rv1846c transcriptional regulator   0.38052
Rv0088 hypothetical protein   0.38038
Rv2111c conserved hypothetical protein   0.37751
Rv3699 conserved hypothetical protein   0.37693
Rv0490 two component system sensor histidine kinase senX3   0.37105
Rv3816c acyltransferase   0.37068
Rv0065 conserved hypothetical protein   0.35564
Rv1894c conserved hypothetical protein   0.35388
Rv2526 hypothetical protein   0.35372
Rv2576c conserved membrane protein   0.35308
Rv3854c monooxygenase ethA   0.35062
Rv3052c hypothetical protein nrdI   0.35012
Rv0186 beta-glucosidase bglS   0.34904
Rv0274 conserved hypothetical protein   0.34688
Rv1593c conserved hypothetical protein   0.34659
Rv3583c transcriptional regulator   0.34435
Rv3537 dehydrogenase   0.34377
Rv0251c heat shock protein hsp   0.33997
Rv2495c dihydrolipoamide S-acetyltransferase E2 component pdhC   0.33836
Rv1577c phiRv1 phage protein   0.33812
Rv2583c GTP pyrophosphokinase relA   0.33784
Rv2010 conserved hypothetical protein   0.33782
Rv0595c conserved hypothetical protein   0.33705
Rv1286 bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC   0.33631
Rv1397c conserved hypothetical protein   0.33606
Rv2827c hypothetical protein   0.33597
Rv2744c conserved alanine rich protein   0.33579
Rv1460 transcriptional regulator   0.33223
Rv0066c isocitrate dehydrogenase icd2   0.33204
Rv1332 transcriptional regulator   0.33127
Rv3406 dioxygenase   0.3302
Rv2925c ribonuclease III rnc   0.33015
Rv1350 3-oxoacyl-[acyl-carrier protein] reductase fabG2   0.32954
Rv1601 imidazole glycerol-phosphate dehydratase hisB   0.32829
Rv3760 conserved membrane protein   0.32674
Rv0064 conserved membrane protein   0.32652
Rv2011c conserved hypothetical protein   0.32629
Rv0670 endonuclease IV end   0.32263
Rv3067 conserved hypothetical protein   0.32213
Rv2500c acyl-CoA dehydrogenase fadE19   0.32086
Rv1416 riboflavin synthase beta chain ribH   0.32009
Rv1405c methyltransferase   0.31987
Rv2497c pyruvate dehydrogenase E1 component alpha subunit pdhA   0.31828
Rv2651c phiRv2 phage protease   0.31771
Rv2280 dehydrogenase   0.31623
Rv0931c transmembrane serine/threonine-protein kinase D pknD   0.31389
Rv1492 methylmalonyl-CoA mutase small subunit mutA   0.31379
Rv0549c conserved hypothetical protein   0.31363
Rv3874 10 kda culture filtrate antigen esxB   0.31255
Rv3875 6 kda early secretory antigenic target esxA   0.31225
Rv1221 alternative RNA polymerase sigma factor sigE   0.312
Rv0939 bifunctional 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/cyclase/dehydrase   0.31174
Rv1442 biotin sulfoxide reductase bisC   0.31169
Rv2816c conserved hypothetical protein   0.31059
Rv1994c transcriptional regulator   0.31014
Rv3503c ferredoxin fdxD   0.30999
Rv0195 two component system transcriptional regulator, luxR-family   0.30768
Rv0560c benzoquinone methyltransferase   0.30456
Rv2460c ATP-dependent clp protease proteolytic subunit 2 clpP2   0.30387
Rv0792c transcriptional regulator, gntR-family   0.30321
Rv2868c 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE   0.30273
Rv3861 hypothetical protein   0.30243
Rv2501c acetyl-/propionyl-CoA carboxylase alpha subunit accA1   0.30237
Rv1390 DNA-directed RNA polymerase omega chain rpoZ   0.30197
Rv1056 conserved hypothetical protein   0.30087
Rv2326c transmembrane ATP-binding protein ABC transorter   0.30049