Correlation Catalog M. tuberculosis H37Rv: Rv3223c - alternative RNA polymerase sigma factor sigH

<< Rv3222c
Rv3224 >>
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Distribution of gene correlation: Rv3223c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2457c ATP-dependent clp protease ATP-binding subunit clpX   -0.38679
Rv3877 conserved membrane protein   -0.33711
Rv2951c oxidoreductase   -0.33452
Rv0503c cyclopropane-fatty-acyl-phospholipid synthase 2 cmaA2   -0.33298
Rv0479c conserved membrane protein   -0.32384
Rv2347c Esat-6 like protein esxP   -0.32061
Rv0287 esat-6 like protein esxG   -0.3099
Rv2564 glutamine-transport ATP-binding protein ABC transporter glnQ   -0.30686
Rv1987 chitinase   -0.30496
Rv1305 ATP synthase C chain atpE   -0.30326
Rv1677 lipoprotein dsbF   -0.30238
Rv1197 esat-6 like protein esxK   -0.30016
Rv1023 enolase eno   -0.30004

Genes with positive correlation ?

 Categories Enriched ?: K O

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0140 conserved hypothetical protein   0.64561
Rv2466c conserved hypothetical protein   0.6426
Rv3222c conserved hypothetical protein   0.63265
Rv3206c molybdenum cofactor biosynthesis protein moeB1   0.61989
Rv3054c conserved hypothetical protein   0.61928
Rv2465c isomerase   0.57845
Rv0384c endopeptidase ATP binding protein chain B clpB   0.57539
Rv1874 hypothetical protein   0.54828
Rv1528c polyketide synthase associated protein papA4   0.54704
Rv0792c transcriptional regulator, gntR-family   0.53215
Rv1875 conserved hypothetical protein   0.51251
Rv3225c transferase   0.49647
Rv3463 conserved hypothetical protein   0.49246
Rv3053c glutaredoxin-like electron transport protein nrdH   0.47752
Rv2694c conserved hypothetical protein   0.46226
Rv1471 thioredoxin trxB1   0.44591
Rv1831 hypothetical protein   0.43163
Rv0251c heat shock protein hsp   0.42692
Rv0793 conserved hypothetical protein   0.4221
Rv0791c conserved hypothetical protein   0.42082
Rv3334 transcriptional regulator, merR-family   0.42013
Rv0687 short-chain type dehydrogenase/reductase   0.41992
Rv2332 NAD-dependent malate oxidoreductase mez   0.41697
Rv0790c hypothetical protein   0.41292
Rv1046c hypothetical protein   0.4114
Rv2517c hypothetical protein   0.39577
Rv3205c conserved hypothetical protein   0.39463
Rv3173c transcriptional regulator, tetR/acrR-family   0.38994
Rv1909c ferric uptake regulation protein furA   0.38831
Rv3340 O-acetylhomoserine sulfhydrylase metC   0.38814
Rv3642c hypothetical protein   0.38565
Rv3917c chromosome partitioning protein parB   0.38357
Rv2034 arsR-type repressor protein   0.38216
Rv3052c hypothetical protein nrdI   0.37926
Rv0302 transcriptional regulator, tetR/acrR-family   0.37498
Rv3182 conserved hypothetical protein   0.37281
Rv3164c methanol dehydrogenase transcriptional regulator moxR3   0.3653
Rv0834c PE-PGRS family protein   0.36359
Rv1936 monooxygenase   0.36082
Rv1876 bacterioferritin bfrA   0.36072
Rv3058c transcriptional regulator, tetR-family   0.3606
Rv1285 sulfate adenylyltransferase subunit 2 cysD   0.35977
Rv0654 dioxygenase   0.358
Rv1460 transcriptional regulator   0.35774
Rv0750 conserved hypothetical protein   0.3553
Rv0846c oxidase   0.35328
Rv2035 conserved hypothetical protein   0.35151
Rv0742 PE-PGRS family protein   0.35114
Rv2707 conserved alanine and leucine rich membrane protein   0.3502
Rv2710 RNA polymerase sigma factor sigB   0.34895
Rv2744c conserved alanine rich protein   0.34772
Rv0137c peptide methionine sulfoxide reductase msrA   0.34653
Rv2295 conserved hypothetical protein   0.3415
Rv1152 transcriptional regulator   0.3411
Rv1277 conserved hypothetical protein   0.34044
Rv2516c hypothetical protein   0.34004
Rv1450c PE-PGRS family protein   0.33788
Rv2657c phiRv2 phage protein   0.33607
Rv3560c acyl-CoA dehydrogenase fadE30   0.33444
Rv2204c conserved hypothetical protein   0.33075
Rv2208 cobalamin 5-phosphate synthase cobS   0.32914
Rv0240 conserved hypothetical protein   0.32873
Rv2617c transmembrane protein   0.3286
Rv0333 hypothetical protein   0.32856
Rv2020c conserved hypothetical protein   0.3255
Rv1298 50S ribosomal protein L31 rpmE   0.3254
Rv2077c conserved membrane protein   0.32448
Rv3445c Esat-6 like protein esxU   0.31899
Rv2526 hypothetical protein   0.31828
Rv1894c conserved hypothetical protein   0.31636
Rv3176c epoxide hydrolase mesT   0.3163
Rv1674c transcriptional regulator   0.31404
Rv3674c endonuclease III nth   0.31385
Rv3270 metal cation transporting P-type ATPase ctpC   0.31353
Rv3742c oxidoreductase   0.31347
Rv3047c hypothetical protein   0.31267
Rv3180c hypothetical alanine rich protein   0.3126
Rv1929c conserved hypothetical protein   0.31158
Rv2865 conserved hypothetical protein   0.31035
Rv1877 conserved membrane protein   0.30725
Rv3204 DNA-methyltransferase   0.3069
Rv1222 conserved hypothetical protein   0.30615
Rv2963 membrane protein   0.3053
Rv1586c phiRv1 integrase   0.30506
Rv1840c PE-PGRS family protein   0.30491
Rv2878c soluble secreted antigen mpt53 precursor   0.3046
Rv0810c conserved hypothetical protein   0.30458
Rv2780 40 kda secreted L-alanine dehydrogenase ald   0.30432
Rv3188 conserved hypothetical protein   0.30415
Rv0068 oxidoreductase   0.30367
Rv0197 oxidoreductase   0.30341
Rv0678 conserved hypothetical protein   0.30297
Rv1907c hypothetical protein   0.30243
Rv1265 hypothetical protein   0.30218
Rv2373c chaperone protein dnaJ2   0.30029