Correlation Catalog M. tuberculosis H37Rv: Rv1298 - 50S ribosomal protein L31 rpmE

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Distribution of gene correlation: Rv1298 vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3087 conserved hypothetical protein   -0.43358
Rv0262c aminoglycoside 2-N-acetyltransferase aac   -0.42885
Rv3088 conserved hypothetical protein   -0.40136
Rv3699 conserved hypothetical protein   -0.39992
Rv2485c carboxylesterase lipQ   -0.39106
Rv1625c membrane-anchored adenylyl cyclase cya   -0.38077
Rv3083 monooxygenase   -0.37821
Rv0278c PE-PGRS family protein   -0.37606
Rv3059 cytochrome P450 136 cyp136   -0.36629
Rv3819 hypothetical protein   -0.36431
Rv3109 molybdenum cofactor biosynthesis protein A moaA1   -0.35739
Rv0304c PPE family protein   -0.3564
Rv1029 potassium-transporting ATPase A chain kdpA   -0.35626
Rv1271c conserved secreted protein   -0.35561
Rv3760 conserved membrane protein   -0.35486
Rv1620c transmembrane ATP-binding protein ABC transporter cydC   -0.35364
Rv3359 oxidoreductase   -0.35334
Rv0397 13E12 repeat family protein   -0.35323
Rv0120c elongation factor G fusA2   -0.35213
Rv1075c conserved exported protein   -0.34901
Rv0261c membrane nitrite extrusion protein narK3   -0.34828
Rv3427c transposase   -0.34823
Rv1499 hypothetical protein   -0.34654
Rv1393c monooxygenase   -0.34641
Rv3089 fatty-acid-CoA ligase fadD13   -0.34584
Rv2317 sugar-transport membrane protein ABC transporter uspB   -0.34583
Rv0837c hypothetical protein   -0.3437
Rv2817c conserved hypothetical protein   -0.34256
Rv2170 conserved hypothetical protein   -0.34219
Rv3684 lyase   -0.341
Rv2679 enoyl-CoA hydratase echA15   -0.34034
Rv1575 phiRv1 phage protein   -0.33975
Rv3086 zinc-type alcohol dehydrogenase adhD   -0.33943
Rv1621c transmembrane ATP-binding protein ABC transporter cydD   -0.33849
Rv0505c phosphoserine phosphatase serB1   -0.33645
Rv3349c transposase   -0.33523
Rv0293c conserved hypothetical protein   -0.33442
Rv2042c conserved hypothetical protein   -0.33388
Rv0311 hypothetical protein   -0.33381
Rv0355c PPE family protein   -0.33378
Rv1777 cytochrome P450 144 cyp144   -0.33292
Rv0548c naphthoate synthase menB   -0.33276
Rv1752 conserved hypothetical protein   -0.33161
Rv3128c conserved hypothetical protein   -0.33134
Rv0343 isoniazid inductible gene protein iniC   -0.33046
Rv0453 PPE family protein   -0.32837
Rv0334 alpha-D-glucose-1-phosphate thymidylyltransferase rmlA   -0.328
Rv2577 conserved hypothetical protein   -0.32629
Rv0621 membrane protein   -0.32603
Rv0981 mycobacterial persistence regulator mprA   -0.3251
Rv1862 alcohol dehydrogenase adhA   -0.32503
Rv1918c PPE family protein   -0.32295
Rv0380c RNA methyltransferase   -0.32282
Rv0408 phosphate acetyltransferase pta   -0.32259
Rv0168 hypothetical membrane protein yrbE1B   -0.32246
Rv3111 molybdenum cofactor biosynthesis protein C moaC1   -0.32242
Rv1552 fumarate reductase flavoprotein subunit frdA   -0.31994
Rv0094c conserved hypothetical protein   -0.31946
Rv1543 fatty-acyl-CoA reductase   -0.31803
Rv3616c conserved alanine and glycine rich protein   -0.31774
Rv1246c conserved hypothetical protein   -0.31751
Rv1497 esterase lipL   -0.31719
Rv3615c conserved hypothetical protein   -0.31715
Rv3614c conserved hypothetical protein   -0.31634
Rv2045c carboxylesterase lipT   -0.3162
Rv0977 PE-PGRS family protein   -0.31524
Rv1880c cytochrome P450 140 cyp140   -0.31463
Rv3577 conserved hypothetical protein   -0.31381
Rv3809c UDP-galactopyranose mutase glf   -0.3126
Rv2233   -0.31219
Rv1582c phiRv1 phage protein   -0.31093
Rv3131 conserved hypothetical protein   -0.3103
Rv1553 fumarate reductase iron-sulfur subunit frdB   -0.31029
Rv3811 conserved hypothetical protein   -0.30969
Rv0233 ribonucleoside-diphosphate reductase beta chain nrdB   -0.30967
Rv3293 piperideine-6-carboxilic acid dehydrogenase pcd   -0.30901
Rv3497c MCE-family protein mce4C   -0.3072
Rv1291c conserved secreted protein   -0.30704
Rv0836c hypothetical protein   -0.30689
Rv0591 MCE-family protein mce2C   -0.30645
Rv3728 conserved membrane protein   -0.30623
Rv3112 molybdenum cofactor biosynthesis protein D moaD1   -0.30599
Rv0102 conserved membrane protein   -0.30532
Rv1551 acyltransferase plsB1   -0.30488
Rv2338c molybdopterin biosynthesis protein moeW   -0.30464
Rv3209 conserved proline and threonine rich protein   -0.30429
Rv0224c methyltransferase/methylase   -0.30382
Rv2823c conserved hypothetical protein   -0.30368
Rv1433 hypothetical exported protein   -0.30283
Rv1997 metal cation transporting P-type ATPase ctpF   -0.30139

Genes with positive correlation ?

 Categories Enriched ?: J

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3462c translation initiation factor IF-1 infA   0.61471
Rv1300 hypothetical protein hemK   0.57969
Rv1644 23S rRNA methyltransferase tsnR   0.57116
Rv3460c 30S ribosomal protein S13 rpsM   0.56218
Rv1643 50S ribosomal protein L20 rplT   0.55277
Rv2839c translation initiation factor IF-2 infB   0.55017
Rv3461c 50S ribosomal protein L36 rpmJ   0.54585
Rv1299 peptide chain release factor 1 prfA   0.52641
Rv3459c 30S ribosomal protein S11 rpsK   0.52566
Rv1642 50S ribosomal protein L35 rpmI   0.52106
Rv3924c 50S ribosomal protein L34 rpmH   0.5114
Rv3443c 50S ribosomal protein L13 rplM   0.50886
Rv0352 chaperone protein dnaJ1   0.5061
Rv1015c 50S ribosomal protein L25 rplY   0.50515
Rv3211 ATP-dependent RNA helicase rhlE   0.49955
Rv0703 50S ribosomal protein L23 rplW   0.49341
Rv2784c lipoprotein lppU   0.4928
Rv2838c ribosome-binding factor A rbfA   0.49265
Rv1080c transcription elongation factor greA   0.49169
Rv2904c 50S ribosomal protein L19 rplS   0.48915
Rv0702 50S ribosomal protein L4 rplD   0.48849
Rv1297 transcription termination factor rho   0.48623
Rv1641 initiation factor IF-3 infC   0.48491
Rv2890c 30S ribosomal protein S2 rpsB   0.48236
Rv0700 30S ribosomal protein S10 rpsJ   0.48128
Rv1472 enoyl-CoA hydratase echA12   0.48122
Rv0145 conserved hypothetical protein   0.48083
Rv0701 50S ribosomal protein L3 rplC   0.47833
Rv0715 50S ribosomal protein L24 rplX   0.47809
Rv3458c 30S ribosomal protein S4 rpsD   0.47621
Rv1533 conserved hypothetical protein   0.47495
Rv3804c secreted fibronectin-binding protein antigen fbpA   0.47393
Rv0474 transcriptional regulator   0.47331
Rv3442c 30S ribosomal protein S9 rpsI   0.47007
Rv0704 50S ribosomal protein L2 rplB   0.46924
Rv3219 transcriptional regulator whib-like whiB1   0.46921
Rv0635 conserved hypothetical protein   0.46895
Rv3456c 50S ribosomal protein L17 rplQ   0.46885
Rv0718 30S ribosomal protein S8 rpsH   0.46864
Rv2888c amidase amiC   0.4675
Rv3457c DNA-directed RNA polymerase alpha chain rpoA   0.46484
Rv0722 50S ribosomal protein L30 rpmD   0.46285
Rv0714 50S ribosomal protein L14 rplN   0.46229
Rv0641 50S ribosomal protein L1 rplA   0.46217
Rv2442c 50S ribosomal protein L21 rplU   0.45885
Rv0682 30S ribosomal protein S12 rpsL   0.45833
Rv2930 fatty-acid-CoA ligase fadD26   0.45721
Rv3922c hemolysin   0.45267
Rv0706 50S ribosomal protein L22 rplV   0.45254
Rv0053 30S ribosomal protein S6 rpsF   0.45167
Rv2699c conserved hypothetical protein   0.45082
Rv0466 conserved hypothetical protein   0.4503
Rv3603c conserved alanine and leucine rich protein   0.44986
Rv0475 iron-regulated heparin binding hemagglutinin hbhA   0.44969
Rv2785c 30S ribosomal protein S15 rpsO   0.44595
Rv0476 conserved membrane protein   0.44005
Rv2840c conserved hypothetical protein   0.43999
Rv2441c 50S ribosomal protein L27 rpmA   0.43883
Rv0639 transcription antitermination protein nusG   0.43644
Rv1473 macrolide-transport ATP-binding protein ABC transporter   0.43478
Rv0350 chaperone protein dnaK   0.43353
Rv1471 thioredoxin trxB1   0.43317
Rv2707 conserved alanine and leucine rich membrane protein   0.43209
Rv0684 elongation factor G fusA1   0.43097
Rv0477 conserved secreted protein   0.42974
Rv0951 succinyl-CoA synthetase beta chain sucC   0.42888
Rv0705 30S ribosomal protein S19 rpsS   0.42802
Rv3455c tRNA pseudouridine synthase A truA   0.42735
Rv1177 ferredoxin fdxC   0.42724
Rv0719 50S ribosomal protein L6 rplF   0.42673
Rv1194c conserved hypothetical protein   0.42533
Rv1483 3-oxoacyl-[acyl-carrier protein] reductase fabG1   0.42451
Rv0651 50S ribosomal protein L10 rplJ   0.42349
Rv1379 pyrimidine operon regulatory protein pyrR   0.42348
Rv2940c multifunctional mycocerosic acid synthase membrane-associated mas   0.42015
Rv0351 chaperone grpE   0.41977
Rv1494 hypothetical protein   0.41904
Rv0922 transposase   0.41721
Rv2871 conserved hypothetical protein   0.41719
Rv0716 50S ribosomal protein L5 rplE   0.41695
Rv3919c glucose-inhibited division protein B gid   0.41309
Rv3002c acetolactate synthase small subunit ilvN   0.41283
Rv0640 50S ribosomal protein L11 rplK   0.41184
Rv2837c conserved hypothetical protein   0.4106
Rv3580c cysteinyl-tRNA synthetase 1 cysS1   0.4098
Rv0720 50S ribosomal protein L18 rplR   0.40923
Rv0047c conserved hypothetical protein   0.40852
Rv2204c conserved hypothetical protein   0.40808
Rv0717 30S ribosomal protein S14 rpsN1   0.40739
Rv3524 conserved membrane protein   0.40642
Rv0056 50S ribosomal protein L9 rplI   0.40414
Rv2909c 30S ribosomal protein S16 rpsP   0.40366
Rv2440c GTP1/obg-family GTP-binding protein obg   0.40291
Rv1475c iron-regulated aconitate hydratase acn   0.40203
Rv1636 iron-regulated conserved hypothetical protein   0.40079
Rv0859 acyl-CoA thiolase fadA   0.40045
Rv0683 30S ribosomal protein S7 rpsG   0.40003
Rv3920c hypothetical protein   0.39986
Rv2916c signal recognition particle protein ffh   0.39973
Rv0813c conserved hypothetical protein   0.39872
Rv0054 single-strand binding protein ssb   0.39773
Rv3602c pantoate-beta-alanine ligase panC   0.39727
Rv2462c trigger factor protein tig   0.39513
Rv0952 succinyl-CoA synthetase alpha chain sucD   0.39333
Rv3003c acetolactate synthase large subunit ilvB1   0.3924
Rv3628 inorganic pyrophosphatase ppa   0.38937
Rv0638 preprotein translocase secE1   0.38833
Rv1292 arginyl-tRNA synthetase argS   0.38669
Rv0146 conserved hypothetical protein   0.38646
Rv1324 thioredoxin   0.38645
Rv0046c myo-inositol-1-phosphate synthase ino1   0.38639
Rv0667 DNA-directed RNA polymerase beta chain rpoB   0.384
Rv0721 30S ribosomal protein S5 rpsE   0.3837
Rv2932 phenolpthiocerol synthesis type-I polyketide synthase ppsB   0.38323
Rv0298 hypothetical protein   0.3832
Rv1778c hypothetical protein   0.38181
Rv3406 dioxygenase   0.38168
Rv2724c acyl-CoA dehydrogenase fadE20   0.38096
Rv0652 50S ribosomal protein L7/L12 rplL   0.37945
Rv2783c bifunctional polyribonucleotide nucleotidyltransferase gpsI   0.37886
Rv0723 50S ribosomal protein L15 rplO   0.37756
Rv1178 aminotransferase   0.37737
Rv3118 hypothetical protein sseC1   0.37672
Rv2700 conserved secreted protein   0.37531
Rv3396c GMP synthase guaA   0.37505
Rv2584c adenine phosphoribosyltransferase apt   0.37408
Rv0860 fatty-acid oxidation protein fadB   0.37234
Rv0685 iron-regulated elongation factor tu tuf   0.37135
Rv3674c endonuclease III nth   0.37133
Rv2412 30S ribosomal protein S20 rpsT   0.36996
Rv0668 DNA-directed RNA polymerase beta chain rpoC   0.36963
Rv2697c deoxyuridine 5-triphosphate nucleotidohydrolase dut   0.36953
Rv2908c conserved hypothetical protein   0.36874
Rv0353 merR-family heat shock protein transcriptional repressor hspR   0.36821
Rv2585c conserved lipoprotein   0.36805
Rv2704 conserved hypothetical protein   0.36536
Rv2858c aldehyde dehydrogenase aldC   0.365
Rv0483 lipoprotein lprQ   0.36498
Rv0710 30S ribosomal protein S17 rpsQ   0.36495
Rv1103c conserved hypothetical protein   0.36489
Rv0244c acyl-CoA dehydrogenase fadE5   0.36177
Rv2889c elongation factor tsf   0.36165
Rv2595 conserved hypothetical protein   0.36051
Rv0847 lipoprotein lpqS   0.35927
Rv2445c nucleoside diphosphate kinase ndkA   0.35897
Rv1156 conserved hypothetical protein   0.35887
Rv1875 conserved hypothetical protein   0.35887
Rv0707 30S ribosomal protein S3 rpsC   0.35861
Rv0708 50S ribosomal protein L16 rplP   0.35849
Rv2450c resuscitation-promoting factor rpfE   0.35826
Rv3405c transcriptional regulator   0.35817
Rv1839c conserved hypothetical protein   0.35806
Rv2050 conserved hypothetical protein   0.35781
Rv1485 ferrochelatase hemZ   0.35743
Rv2222c glutamine synthetase glnA2   0.35711
Rv3441c phospho-sugar mutase mrsA   0.35708
Rv1831 hypothetical protein   0.35672
Rv0567 methyltransferase/methylase   0.35672
Rv0709 50S ribosomal protein L29 rpmC   0.35609
Rv1628c conserved hypothetical protein   0.35607
Rv2518c lipoprotein lppS   0.35604
Rv1887 hypothetical protein   0.35558
Rv3250c rubredoxin rubB   0.35513
Rv1749c membrane protein   0.35383
Rv3050c transcriptional regulator, asnC-family   0.35302
Rv3117 thiosulfate sulfurtransferase cysA3   0.35088
Rv1344 acyl carrier protein   0.3507
Rv2903c signal peptidase I lepB   0.35034
Rv0562 polyprenyl-diphosphate synthase grcC1   0.35024
Rv1592c conserved hypothetical protein   0.34995
Rv3484 hypothetical protein cpsA   0.34981
Rv2887 transcriptional regulator   0.34876
Rv0510 porphobilinogen deaminase hemC   0.34636
Rv1657 arginine repressor argR   0.34548
Rv2487c PE-PGRS family protein   0.34492
Rv0608 conserved hypothetical protein   0.34413
Rv0814c hypothetical protein sseC2   0.34411
Rv0469 mycolic acid synthase umaA   0.34395
Rv2843 conserved alanine rich membrane protein   0.34366
Rv1811 Mg2+ transport ATPase C mgtC   0.34247
Rv3106 NADPH:adrenodoxin oxidoreductase fprA   0.34097
Rv0545c low affinity inorganic phosphate transporter membrane protein pitA   0.34024
Rv2534c elongation factor P efp   0.33936
Rv2202c carbohydrate kinase cbhK   0.33738
Rv3135 PPE family protein   0.33711
Rv0643c methoxy mycolic acid synthase 3 mmaA3   0.33585
Rv1301 conserved hypothetical protein   0.33504
Rv3440c hypothetical protein   0.33501
Rv1840c PE-PGRS family protein   0.33432
Rv3515c fatty-acid-CoA ligase fadD19   0.33243
Rv3418c 10 kda chaperonin groES   0.33224
Rv3601c aspartate 1-decarboxylase precursor panD   0.33179
Rv3682 bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2   0.33131
Rv0055 30S ribosomal protein rpsR1   0.33071
Rv2519 PE family protein   0.33032
Rv2396 PE-PGRS family protein   0.33028
Rv3373 enoyl-CoA hydratase echA18   0.33027
Rv2454c oxidoreductase beta subunit   0.33022
Rv3597c iron-regulated lsr2 protein precursor   0.33003
Rv0485 transcriptional regulator   0.32997
Rv0383c conserved secreted protein   0.3294
Rv1484 NADH-dependent enoyl-[acyl-carrier-protein] reductase inhA   0.32873
Rv3407 conserved hypothetical protein   0.32863
Rv2959c methyltransferase/methylase   0.3285
Rv3710 2-isopropylmalate synthase leuA   0.3279
Rv2048c hypothetical protein   0.32784
Rv0636 conserved hypothetical protein   0.32716
Rv1420 excinuclease ABC subunit C uvrC   0.32633
Rv2936 daunorubicin-dim-transport ATP-binding protein ABC transporter drrA   0.32629
Rv2931 phenolpthiocerol synthesis type-I polyketide synthase ppsA   0.32574
Rv3223c alternative RNA polymerase sigma factor sigH   0.3254
Rv0249c succinate dehydrogenase membrane anchor subunit   0.32423
Rv1389 guanylate kinase gmk   0.32295
Rv2907c 16S rRNA processing protein rimM   0.32198
Rv0462 dihydrolipoamide dehydrogenase lpd   0.32153
Rv2950c fatty-acid-CoA ligase fadD29   0.32077
Rv0440 60 kda chaperonin 2 groEL2   0.3199
Rv3248c adenosylhomocysteinase sahH   0.31965
Rv3722c conserved hypothetical protein   0.31936
Rv3102c cell division ATP-binding protein ftsE   0.31883
Rv0203 hypothetical exported protein   0.31854
Rv3220c two component system sensor kinase   0.31832
Rv1093 serine hydroxymethyltransferase 1 glyA1   0.31792
Rv0815c thiosulfate sulfurtransferase cysA2   0.31719
Rv3225c transferase   0.31705
Rv2104c conserved hypothetical protein   0.31591
Rv3388 PE-PGRS family protein   0.31471
Rv2271 conserved hypothetical protein   0.31432
Rv0626 conserved hypothetical protein   0.31405
Rv0467 isocitrate lyase icl   0.31314
Rv1168c PPE family protein   0.31313
Rv0192 conserved hypothetical protein   0.31271
Rv1684 conserved hypothetical protein   0.31255
Rv3400 hydrolase   0.31231
Rv2990c hypothetical protein   0.31125
Rv3921c conserved membrane protein   0.31111
Rv3590c PE-PGRS family protein   0.31105
Rv1361c PPE family protein   0.31035
Rv0726c conserved hypothetical protein   0.30985
Rv1691 conserved hypothetical protein   0.30939
Rv2861c methionine aminopeptidase mapB   0.30922
Rv3049c monooxygenase   0.30886
Rv1060 hypothetical protein   0.30885
Rv3221c biotinylated protein   0.30877
Rv3463 conserved hypothetical protein   0.30858
Rv0932c periplasmic phosphate-binding lipoprotein pstS2   0.30803
Rv0211 iron-regulated phosphoenolpyruvate carboxykinase pckA   0.30745
Rv2132 conserved hypothetical protein   0.30729
Rv2205c conserved hypothetical protein   0.30728
Rv2962c glycosyltransferase   0.30645
Rv2067c conserved hypothetical protein   0.306
Rv1009 resuscitation-promoting factor rpfB   0.30541
Rv3716c conserved hypothetical protein   0.30462
Rv2120c conserved membrane protein   0.30386
Rv1980c immunogenic protein mpt64   0.30359
Rv2211c aminomethyltransferase gcvT   0.30281
Rv2226 conserved hypothetical protein   0.30264
Rv1451 cytochrome C oxidase assembly factor ctaB   0.3016
Rv0921 resolvase   0.30152
Rv3105c peptide chain release factor 2 prfB   0.30028
Rv0478 deoxyribose-phosphate aldolase deoC   0.30023