Correlation Catalog M. tuberculosis H37Rv: Rv3060c - transcriptional regulator, gntR-family

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Rv3061c >>
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Distribution of gene correlation: Rv3060c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3083 monooxygenase   -0.44998
Rv0166 fatty-acid-CoA ligase fadD5   -0.44183
Rv3084 acetyl-hydrolase/esterase lipR   -0.43867
Rv0108c hypothetical protein   -0.42396
Rv0257c   -0.41641
Rv3477 PE family protein   -0.4112
Rv2348c hypothetical protein   -0.40951
Rv0169 MCE-family protein mce1A   -0.40943
Rv0170 MCE-family protein mce1B   -0.40245
Rv0171 MCE-family protein mce1C   -0.38736
Rv1368 lipoprotein lprF   -0.38396
Rv1883c conserved hypothetical protein   -0.38386
Rv0001 chromosomal replication initiator protein dnaA   -0.3791
Rv0168 hypothetical membrane protein yrbE1B   -0.36983
Rv1815 conserved hypothetical protein   -0.36627
Rv2914c transmembrane serine/threonine-protein kinase I pknI   -0.36146
Rv1632c hypothetical protein   -0.3587
Rv0165c transcriptional regulator, gntR-family   -0.35528
Rv0696 membrane sugar transferase   -0.3528
Rv2633c hypothetical protein   -0.35088
Rv3910 conserved membrane protein   -0.34839
Rv1547 DNA polymerase III alpha chain dnaE1   -0.34807
Rv0831c conserved hypothetical protein   -0.3478
Rv0033 acyl carrier protein acpA   -0.34573
Rv3146 NADH dehydrogenase I chain B nuoB   -0.34099
Rv3788 hypothetical protein   -0.34087
Rv0995 ribosomal-protein-alanine acetyltransferase rimJ   -0.33329
Rv1242 conserved hypothetical protein   -0.33238
Rv0655 ribonucleotide-transport ATP-binding protein ABC transporter mkl   -0.32968
Rv0167 hypothetical membrane protein yrbE1A   -0.32947
Rv2459 conserved membrane transport protein   -0.32893
Rv2080 lipoprotein lppJ   -0.32751
Rv0172 MCE-family protein mce1D   -0.3273
Rv3438 conserved hypothetical protein   -0.32483
Rv3750c excisionase   -0.32482
Rv3725 oxidoreductase   -0.32416
Rv0225 conserved hypothetical protein   -0.32377
Rv1444c hypothetical protein   -0.32227
Rv3676 transcriptional regulator, crp/fnr-family   -0.32192
Rv1271c conserved secreted protein   -0.32148
Rv3390 lipoprotein lpqD   -0.31947
Rv0243 acetyl-CoA acyltransferase fadA2   -0.31589
Rv1884c resuscitation-promoting factor rpfC   -0.31497
Rv2046 lipoprotein lppI   -0.31446
Rv0360c conserved hypothetical protein   -0.31246
Rv0231 acyl-CoA dehydrogenase fadE4   -0.31151
Rv2082 conserved hypothetical protein   -0.31091
Rv2632c conserved hypothetical protein   -0.31091
Rv3753c conserved hypothetical protein   -0.3093
Rv1892 membrane protein   -0.30853
Rv2302 conserved hypothetical protein   -0.30817
Rv2301 cutinase cut2   -0.30777
Rv0242c 3-oxoacyl-[acyl-carrier protein] reductase fabG4   -0.30504
Rv2190c conserved hypothetical protein   -0.30351
Rv1230c membrane protein   -0.30229
Rv0409 acetate kinase ackA   -0.30069
Rv0566c conserved hypothetical protein   -0.30009

Genes with positive correlation ?

 Categories Enriched ?: I

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3061c acyl-CoA dehydrogenase fadE22   0.58742
Rv0711 arylsulfatase atsA   0.58627
Rv3574 transcriptional regulator, tetR-family   0.56562
Rv3534c 4-hydroxy-2-oxovalerate aldolase   0.53197
Rv3406 dioxygenase   0.5293
Rv3516 enoyl-CoA hydratase echA19   0.52546
Rv0493c conserved hypothetical protein   0.5188
Rv0476 conserved membrane protein   0.51848
Rv3537 dehydrogenase   0.50966
Rv0475 iron-regulated heparin binding hemagglutinin hbhA   0.50572
Rv0712 conserved hypothetical protein   0.50424
Rv1168c PPE family protein   0.49846
Rv0474 transcriptional regulator   0.4927
Rv1532c conserved hypothetical protein   0.49158
Rv1461 conserved hypothetical protein   0.48173
Rv2784c lipoprotein lppU   0.48121
Rv3093c oxidoreductase   0.47852
Rv0973c acetyl-/propionyl-CoA carboxylase alpha subunit accA2   0.47824
Rv0830 conserved hypothetical protein   0.47646
Rv0485 transcriptional regulator   0.47611
Rv3568c biphenyl-2,3-diol 1,2-dioxygenase bphC   0.47355
Rv3535c acetaldehyde dehydrogenase   0.47212
Rv3573c acyl-CoA dehydrogenase fadE34   0.46647
Rv3570c oxidoreductase   0.46513
Rv1462 conserved hypothetical protein   0.45917
Rv3515c fatty-acid-CoA ligase fadD19   0.45601
Rv2724c acyl-CoA dehydrogenase fadE20   0.45371
Rv0350 chaperone protein dnaK   0.44576
Rv3502c short-chain type dehydrogenase/reductase   0.44476
Rv3544c acyl-CoA dehydrogenase fadE28   0.43996
Rv2707 conserved alanine and leucine rich membrane protein   0.43644
Rv0860 fatty-acid oxidation protein fadB   0.43431
Rv3452 cutinase precursor cut4   0.43221
Rv3546 acetyl-CoA acetyltransferase fadA5   0.43163
Rv3173c transcriptional regulator, tetR/acrR-family   0.43123
Rv1169c PE family protein   0.42878
Rv3550 enoyl-CoA hydratase echA20   0.42784
Rv0859 acyl-CoA thiolase fadA   0.42775
Rv1463 ABC transporter ATP-binding protein   0.42758
Rv0477 conserved secreted protein   0.42319
Rv3538 dehydrogenase   0.42196
Rv0353 merR-family heat shock protein transcriptional repressor hspR   0.41901
Rv3567c oxidoreductase   0.41651
Rv0244c acyl-CoA dehydrogenase fadE5   0.41603
Rv1894c conserved hypothetical protein   0.41408
Rv2012 conserved hypothetical protein   0.4118
Rv0196 transcriptional regulator   0.41109
Rv3569c 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase bphD   0.41073
Rv3270 metal cation transporting P-type ATPase ctpC   0.40688
Rv2640c transcriptional regulator, arsR-family   0.4055
Rv1576c phiRv1 phage protein   0.40483
Rv3504 acyl-CoA dehydrogenase fadE26   0.40315
Rv1464 cysteine desulfurase csd   0.4018
Rv1533 conserved hypothetical protein   0.4006
Rv1534 transcriptional regulator   0.40039
Rv1599 histidinol dehydrogenase hisD   0.39865
Rv0351 chaperone grpE   0.39574
Rv0560c benzoquinone methyltransferase   0.39491
Rv1601 imidazole glycerol-phosphate dehydratase hisB   0.3925
Rv0826 conserved hypothetical protein   0.39243
Rv1600 histidinol-phosphate aminotransferase hisC1   0.39202
Rv1838c conserved hypothetical protein   0.38958
Rv3545c cytochrome P450 125 cyp125   0.38949
Rv3003c acetolactate synthase large subunit ilvB1   0.38925
Rv2826c hypothetical protein   0.38796
Rv1991c conserved hypothetical protein   0.3872
Rv3503c ferredoxin fdxD   0.3853
Rv2374c heat shock protein transcriptional repressor hrcA   0.38432
Rv0486 mannosyltransferase   0.38134
Rv0467 isocitrate lyase icl   0.38109
Rv1982c conserved hypothetical protein   0.37965
Rv3531c hypothetical protein   0.37776
Rv2497c pyruvate dehydrogenase E1 component alpha subunit pdhA   0.37764
Rv1839c conserved hypothetical protein   0.37567
Rv2704 conserved hypothetical protein   0.37461
Rv1779c hypothetical membrane protein   0.37236
Rv2373c chaperone protein dnaJ2   0.36979
Rv3571 hemoglobine-related protein hmp   0.3694
Rv0068 oxidoreductase   0.36932
Rv3833 transcriptional regulator, araC-family   0.36657
Rv1627c nonspecific lipid-transfer protein   0.36584
Rv0146 conserved hypothetical protein   0.36517
Rv1635c conserved membrane protein   0.36269
Rv3269 conserved hypothetical protein   0.36122
Rv0147 aldehyde dehydrogenase NAD-dependent   0.36084
Rv0384c endopeptidase ATP binding protein chain B clpB   0.35932
Rv0551c fatty-acid-CoA ligase fadD8   0.35923
Rv0352 chaperone protein dnaJ1   0.35917
Rv0726c conserved hypothetical protein   0.3572
Rv0046c myo-inositol-1-phosphate synthase ino1   0.35617
Rv2011c conserved hypothetical protein   0.35596
Rv1832 glycine dehydrogenase gcvB   0.35531
Rv0617 conserved hypothetical protein   0.35487
Rv1465 nitrogen fixation related protein   0.3523
Rv1854c NADH dehydrogenase ndh   0.3504
Rv0412c conserved membrane protein   0.34936
Rv1778c hypothetical protein   0.34882
Rv1593c conserved hypothetical protein   0.34864
Rv0922 transposase   0.34855
Rv1265 hypothetical protein   0.34757
Rv0563 protease transmembrane protein heat shock protein htpX   0.34739
Rv0998 conserved hypothetical protein   0.34637
Rv2743c conserved alanine rich membrane protein   0.34565
Rv1466 conserved hypothetical protein   0.34557
Rv1460 transcriptional regulator   0.34512
Rv3002c acetolactate synthase small subunit ilvN   0.34435
Rv1939 oxidoreductase   0.34225
Rv3599c hypothetical short protein   0.34159
Rv1992c metal cation transporting P-type ATPase ctpG   0.3395
Rv2658c phiRv2 phage protein   0.33767
Rv0197 oxidoreductase   0.33578
Rv3530c oxidoreductase   0.33302
Rv0245 oxidoreductase   0.33301
Rv1474c transcriptional regulator   0.33284
Rv3065 multidrugs transport membrane protein mmr   0.33284
Rv1405c methyltransferase   0.33136
Rv1602 amidotransferase hisH   0.33134
Rv3054c conserved hypothetical protein   0.33074
Rv2016 hypothetical protein   0.33063
Rv3563 acyl-CoA dehydrogenase fadE32   0.33011
Rv3710 2-isopropylmalate synthase leuA   0.32899
Rv0596c conserved hypothetical protein   0.32877
Rv3854c monooxygenase ethA   0.32826
Rv3451 cutinase precursor cut3   0.32821
Rv1721c conserved hypothetical protein   0.32816
Rv3627c conserved hypothetical protein   0.32756
Rv1493 methylmalonyl-CoA mutase large subunit mutB   0.32725
Rv1586c phiRv1 integrase   0.32668
Rv0411c glutamine-binding lipoprotein glnH   0.32547
Rv3522 lipid transfer protein or keto acyl-CoA thiolase ltp4   0.32465
Rv0145 conserved hypothetical protein   0.32356
Rv3176c epoxide hydrolase mesT   0.32285
Rv1628c conserved hypothetical protein   0.32272
Rv2386c isochorismate synthase mbtI   0.322
Rv3540c lipid transfer protein or keto acyl-CoA thiolase ltp2   0.3211
Rv1350 3-oxoacyl-[acyl-carrier protein] reductase fabG2   0.32088
Rv3561 fatty-acid-CoA ligase fadD3   0.31853
Rv3338 conserved hypothetical protein   0.31835
Rv2506 transcriptional regulator, tetR-family   0.31828
Rv0478 deoxyribose-phosphate aldolase deoC   0.31747
Rv1585c phiRv1 phage protein   0.31709
Rv1420 excinuclease ABC subunit C uvrC   0.31703
Rv2824c hypothetical protein   0.317
Rv1592c conserved hypothetical protein   0.31668
Rv3010c 6-phosphofructokinase pfkA   0.31663
Rv3536c hydratase   0.31645
Rv2871 conserved hypothetical protein   0.31631
Rv2602 conserved hypothetical protein   0.31589
Rv1577c phiRv1 phage protein   0.31539
Rv2103c conserved hypothetical protein   0.31533
Rv0211 iron-regulated phosphoenolpyruvate carboxykinase pckA   0.31507
Rv3526 oxidoreductase   0.31437
Rv3094c conserved hypothetical protein   0.31362
Rv2010 conserved hypothetical protein   0.31318
Rv3855 tetR-family transcriptional repressor ethR   0.31095
Rv2225 3-methyl-2-oxobutanoate hydroxymethyltransferase panB   0.31069
Rv2963 membrane protein   0.30863
Rv3610c membrane-bound ell division protein ftsH   0.30696
Rv2471 alpha-glucosidase aglA   0.30694
Rv1492 methylmalonyl-CoA mutase small subunit mutA   0.30687
Rv0327c cytochrome P450 135A1 cyp135A1   0.30596
Rv3188 conserved hypothetical protein   0.30488
Rv3603c conserved alanine and leucine rich protein   0.30434
Rv0148 short-chain type dehydrogenase/reductase   0.3039
Rv3066 transcriptional regulator, deoR-family   0.3027
Rv0921 resolvase   0.30269
Rv3484 hypothetical protein cpsA   0.30201
Rv3079c conserved hypothetical protein   0.30171
Rv2539c shikimate kinase aroK   0.30109
Rv3777 oxidoreductase   0.30102
Rv3422c conserved hypothetical protein   0.30091
Rv1959c conserved hypothetical protein   0.3001