Correlation Catalog M. tuberculosis H37Rv: Rv0555 - bifunctional menaquinone biosynthesis protein menD

<< Rv0554
Rv0556 >>
Click on the question marks for explanations Hide help
Distribution of gene correlation: Rv0555 vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: K

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3289c transmembrane protein   -0.43595
Rv1403c methyltransferase   -0.39222
Rv3503c ferredoxin fdxD   -0.39216
Rv1990c transcriptional regulator   -0.38794
Rv2324 transcriptional regulator, asnC-family   -0.38752
Rv3288c hypothetical protein usfY   -0.38595
Rv3287c anti-sigma factor rsbW   -0.38202
Rv3574 transcriptional regulator, tetR-family   -0.37972
Rv2374c heat shock protein transcriptional repressor hrcA   -0.37904
Rv3504 acyl-CoA dehydrogenase fadE26   -0.37353
Rv3502c short-chain type dehydrogenase/reductase   -0.36935
Rv3486 conserved hypothetical protein   -0.36015
Rv2304c hypothetical protein   -0.36015
Rv1671 membrane protein   -0.35778
Rv1989c hypothetical protein   -0.35437
Rv1405c methyltransferase   -0.35392
Rv3545c cytochrome P450 125 cyp125   -0.35296
Rv1576c phiRv1 phage protein   -0.35279
Rv1991c conserved hypothetical protein   -0.35232
Rv2659c phiRv2 phage integrase   -0.35222
Rv1894c conserved hypothetical protein   -0.35202
Rv1404 transcriptional regulator   -0.34984
Rv2853 PE-PGRS family protein   -0.34955
Rv2501c acetyl-/propionyl-CoA carboxylase alpha subunit accA1   -0.34789
Rv0274 conserved hypothetical protein   -0.34713
Rv3290c L-lysine-epsilon aminotransferase lat   -0.3469
Rv2503c succinyl-CoA:3-ketoacid-coenzyme A transferase beta subunit scoB   -0.34674
Rv3334 transcriptional regulator, merR-family   -0.34548
Rv3079c conserved hypothetical protein   -0.34395
Rv2776c oxidoreductase   -0.34063
Rv3766 hypothetical protein   -0.33852
Rv2779c transcriptional regulator, lrp/asnC-family   -0.32816
Rv1861 conserved membrane protein   -0.32726
Rv2706c hypothetical protein   -0.32556
Rv3535c acetaldehyde dehydrogenase   -0.32465
Rv2749 conserved hypothetical protein   -0.32263
Rv3595c PE-PGRS family protein   -0.32187
Rv2498c citrate (pro-3s)-lyase beta subunit citE   -0.32159
Rv1239c magnesium and cobalt transport transmembrane protein corA   -0.32089
Rv1938 epoxide hydrolase ephB   -0.32043
Rv3167c transcriptional regulator, tetR-family   -0.31931
Rv2504c succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit scoA   -0.31867
Rv3196 conserved hypothetical protein   -0.31858
Rv1992c metal cation transporting P-type ATPase ctpG   -0.31296
Rv2667 ATP-dependent protease ATP-binding subunit clpC2   -0.31135
Rv2797c conserved hypothetical protein   -0.31096
Rv2034 arsR-type repressor protein   -0.31028
Rv2777c conserved hypothetical protein   -0.30985
Rv3573c acyl-CoA dehydrogenase fadE34   -0.30919
Rv3881c conserved alanine and glycine rich protein   -0.30861
Rv3516 enoyl-CoA hydratase echA19   -0.30794
Rv1818c PE-PGRS family protein   -0.30772
Rv0654 dioxygenase   -0.3063
Rv2642 transcriptional regulator, arsR-family   -0.30491
Rv2322c ornithine aminotransferase rocD1   -0.30466
Rv2558 conserved hypothetical protein   -0.30276
Rv3007c oxidoreductase   -0.30179
Rv0747 PE-PGRS family protein   -0.30157
Rv2035 conserved hypothetical protein   -0.30109
Rv3526 oxidoreductase   -0.30101
Rv2255c hypothetical protein   -0.30041

Genes with positive correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0103c cation-transporter P-type ATPase B ctpB   0.54012
Rv0409 acetate kinase ackA   0.51454
Rv0177 MCE-associated protein   0.50577
Rv0444c conserved hypothetical protein   0.47906
Rv0556 conserved membrane protein   0.47598
Rv0923c conserved hypothetical protein   0.46799
Rv0890c transcriptional regulator, luxR-family   0.46381
Rv0050 bifunctional penicillin-binding protein ponA1   0.42181
Rv1547 DNA polymerase III alpha chain dnaE1   0.40752
Rv0433 conserved hypothetical protein   0.40727
Rv0539 dolichyl-phosphate sugar synthase   0.40715
Rv0225 conserved hypothetical protein   0.40675
Rv0531 conserved membrane protein   0.40544
Rv0007 conserved membrane protein   0.40181
Rv0033 acyl carrier protein acpA   0.3991
Rv3795 membrane indolylacetylinositol arabinosyltransferase embB   0.3988
Rv0778 cytochrome P450 126 cyp126   0.39644
Rv0481c hypothetical protein   0.39203
Rv0546c conserved hypothetical protein   0.3874
Rv0554 non-haem peroxidase bpoC   0.38425
Rv1614 prolipoprotein diacylglyceryl transferases lgt   0.38268
Rv1275 lipoprotein lprC   0.3808
Rv2796c lipoprotein lppV   0.37795
Rv0001 chromosomal replication initiator protein dnaA   0.37751
Rv0126 trehalose synthase treS   0.37496
Rv0041 leucyl-tRNA synthetase leuS   0.3705
Rv1618 acyl-CoA thioesterase II tesB1   0.36946
Rv3921c conserved membrane protein   0.36475
Rv0006 DNA gyrase subunit A gyrA   0.36315
Rv0799c conserved hypothetical protein   0.36291
Rv0527 cytochrome C biogenesis protein ccdA   0.35952
Rv1201c transferase   0.35687
Rv0421c conserved hypothetical protein   0.35658
Rv0169 MCE-family protein mce1A   0.35654
Rv0171 MCE-family protein mce1C   0.3561
Rv0226c conserved membrane protein   0.35542
Rv0438c molybdopterin biosynthesis protein moeA2   0.35504
Rv0482 UDP-N-acetylenolpyruvoylglucosamine reductase murB   0.3541
Rv1640c lysyl-tRNA synthetase 2 lysX   0.35181
Rv2082 conserved hypothetical protein   0.35044
Rv0825c conserved hypothetical protein   0.35043
Rv2475c conserved hypothetical protein   0.35029
Rv1282c oligopeptide-transport membrane protein ABC transporter oppC   0.34824
Rv0035 fatty-acid-CoA ligase fadD34   0.34677
Rv0176 MCE-associated transmembrane protein   0.34402
Rv0982 two component system sensor kinase mprB   0.34314
Rv1610 conserved membrane protein   0.34304
Rv1545 hypothetical protein   0.34282
Rv0030 hypothetical protein   0.3428
Rv1208 conserved hypothetical protein   0.34279
Rv1427c long-chain fatty-acid-CoA ligase fadD12   0.34273
Rv0170 MCE-family protein mce1B   0.34061
Rv0436c CDP-diacylglycerol-serine o-phosphatidyltransferase pssA   0.34025
Rv1296 homoserine kinase thrB   0.33985
Rv1613 tryptophan synthase, alpha subunit trpA   0.33878
Rv0010c conserved membrane protein   0.33434
Rv3438 conserved hypothetical protein   0.33401
Rv1708 initiation inhibitor protein   0.33378
Rv1155 conserved hypothetical protein   0.33089
Rv0227c conserved membrane protein   0.33078
Rv2127 L-asparagine permease ansP1   0.3304
Rv0206c transmembrane transport protein mmpL3   0.33021
Rv2992c glutamyl-tRNA synthetase gltS   0.32888
Rv0542c O-succinylbenzoic acid-CoA ligase menE   0.32811
Rv0530 conserved hypothetical protein   0.32747
Rv2587c protein-export membrane protein secD   0.3245
Rv2604c conserved hypothetical protein   0.32422
Rv0153c phosphotyrosine protein phosphatase ptpb   0.32398
Rv1360 oxidoreductase   0.32334
Rv1612 tryptophan synthase, beta subunit trpB   0.32333
Rv0777 adenylosuccinate lyase purB   0.32155
Rv0198c zinc metalloprotease   0.31979
Rv2128 conserved membrane protein   0.31813
Rv0506 membrane protein mmpS2   0.31769
Rv1307 ATP synthase delta chain atpH   0.31689
Rv0051 conserved membrane protein   0.31588
Rv0734 methionine aminopeptidase mapA   0.31497
Rv0773c bifunctional acylase ggtA   0.31483
Rv2427c gamma-glutamyl phosphate reductase protein proA   0.31402
Rv1666c cytochrome P450 139 cyp139   0.31388
Rv0097 oxidoreductase   0.31313
Rv1631 dephospho-CoA kinase coaE   0.31155
Rv2409c conserved hypothetical protein   0.31145
Rv0105c 50S ribosomal protein rpmB1   0.31129
Rv0127 conserved hypothetical protein   0.31009
Rv0107c cation-transporter ATPase I ctpI   0.30913
Rv2790c lipid-transfer protein ltp1   0.30886
Rv1230c membrane protein   0.3081
Rv0073 glutamine-transport ATP-binding protein ABC transporter   0.30803
Rv1281c oligopeptide-transport ATP-binding protein ABC transporter oppD   0.307
Rv2139 dihydroorotate dehydrogenase pyrD   0.30699
Rv1689 tyrosyl-tRNA synthase tyrS   0.30645
Rv3282 conserved hypothetical protein   0.30543
Rv0151c PE family protein   0.30477
Rv0771 4-carboxymuconolactone decarboxylase cmd   0.30402
Rv0034 conserved hypothetical protein   0.30363
Rv0021c conserved hypothetical protein   0.30305
Rv0696 membrane sugar transferase   0.30281
Rv1591 transmembrane protein   0.30176
Rv1659 argininosuccinate lyase argH   0.30173
Rv3792 conserved membrane protein   0.30026