Correlation Catalog M. tuberculosis H37Rv: Rv0002 - DNA polymerase III beta chain dnaN

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Distribution of gene correlation: Rv0002 vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0724 protease IV sppA   -0.49293
Rv1843c inosine-5-monophosphate dehydrogenase guaB1   -0.46523
Rv2364c GTP-binding protein era   -0.45381
Rv2675c conserved hypothetical protein   -0.44612
Rv2368c phosphate starvation-inducible protein phoH1   -0.43861
Rv1846c transcriptional regulator   -0.43307
Rv2372c conserved hypothetical protein   -0.43082
Rv0960 conserved hypothetical protein   -0.4307
Rv1725c conserved hypothetical protein   -0.42729
Rv3197 ABC transporter ATP-binding protein   -0.42262
Rv2325c conserved hypothetical protein   -0.41833
Rv1862 alcohol dehydrogenase adhA   -0.41577
Rv2495c dihydrolipoamide S-acetyltransferase E2 component pdhC   -0.40963
Rv2097c conserved hypothetical protein   -0.40782
Rv3412 conserved hypothetical protein   -0.4067
Rv2711 iron-dependent repressor and activator ideR   -0.40515
Rv3162c membrane protein   -0.40294
Rv1416 riboflavin synthase beta chain ribH   -0.40233
Rv2326c transmembrane ATP-binding protein ABC transorter   -0.40081
Rv1625c membrane-anchored adenylyl cyclase cya   -0.40074
Rv3720 fatty-acid synthase   -0.39875
Rv2507 conserved proline rich membrane protein   -0.39597
Rv1334 conserved hypothetical protein   -0.39407
Rv1377c transferase   -0.39322
Rv0981 mycobacterial persistence regulator mprA   -0.39313
Rv3609c GTP cyclohydrolase I folE   -0.39158
Rv1925 acyl-CoA ligase fadD31   -0.38928
Rv0400c acyl-CoA dehydrogenase fadE7   -0.38825
Rv3870 conserved membrane protein   -0.38761
Rv3206c molybdenum cofactor biosynthesis protein moeB1   -0.3872
Rv1027c transcriptional regulator kdpE   -0.38157
Rv3608c dihydropteroate synthase 1 folp   -0.38113
Rv2109c proteasome alpha subunit prcA   -0.37844
Rv3869 conserved membrane protein   -0.37577
Rv2925c ribonuclease III rnc   -0.37467
Rv1126c conserved hypothetical protein   -0.37452
Rv1333 hydrolase   -0.37409
Rv3209 conserved proline and threonine rich protein   -0.37403
Rv3856c conserved hypothetical protein   -0.37382
Rv2686c antibiotic-transport membrane leucine and alanine and valine rich protein ABC transporter   -0.37354
Rv3238c conserved membrane protein   -0.37248
Rv0931c transmembrane serine/threonine-protein kinase D pknD   -0.37139
Rv2469c conserved hypothetical protein   -0.36874
Rv2053c transmembrane protein   -0.36555
Rv3051c ribonucleoside-diphosphate reductase alpha chain nrdE   -0.36496
Rv2620c conserved membrane protein   -0.36284
Rv2345 conserved membrane protein   -0.36196
Rv3339c isocitrate dehydrogenase icd1   -0.35989
Rv3606c 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK   -0.35615
Rv2005c conserved hypothetical protein   -0.35588
Rv1916 isocitrate lyase aceAb   -0.35562
Rv2964 formyltetrahydrofolate deformylase purU   -0.3544
Rv0758 two component system sensor kinase phoR   -0.3544
Rv2367c hypothetical protein   -0.35435
Rv3244c lipoprotein lpqB   -0.35334
Rv3757c osmoprotectant proW   -0.35273
Rv0490 two component system sensor histidine kinase senX3   -0.35038
Rv3450c conserved membrane protein   -0.35031
Rv2115c ATPase   -0.35009
Rv3046c conserved hypothetical protein   -0.34995
Rv3871 conserved hypothetical protein   -0.34982
Rv0786c conserved hypothetical protein   -0.34951
Rv1606 phosphoribosyl-AMP-1,6-cyclohydrolase hisI   -0.34814
Rv1622c membrane cytochrome D ubiquinol oxidase subunit II cydB   -0.34773
Rv2500c acyl-CoA dehydrogenase fadE19   -0.34724
Rv1540 conserved hypothetical protein   -0.34717
Rv1845c conserved membrane protein   -0.34677
Rv0064 conserved membrane protein   -0.34596
Rv1335 9.5 kda culture filtrate antigen cfp10a   -0.34452
Rv1620c transmembrane ATP-binding protein ABC transporter cydC   -0.34306
Rv3312c conserved hypothetical protein   -0.34201
Rv2092c ATP-dependent DNA helicase helY   -0.34108
Rv2830c conserved hypothetical protein   -0.33965
Rv2941 fatty-acid-CoA ligase fadD28   -0.33913
Rv2828c conserved hypothetical protein   -0.33871
Rv0939 bifunctional 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/cyclase/dehydrase   -0.3381
Rv0038 conserved hypothetical protein   -0.33746
Rv3879c hypothetical alanine and proline rich protein   -0.33658
Rv1082 mycothiol conjugate amidase mca   -0.33566
Rv3588c carbonic anhydrase   -0.33491
Rv3010c 6-phosphofructokinase pfkA   -0.33398
Rv3466 conserved hypothetical protein   -0.33263
Rv3142c hypothetical protein   -0.3323
Rv3437 conserved membrane protein   -0.33198
Rv3103c hypothetical proline rich protein   -0.33153
Rv0549c conserved hypothetical protein   -0.33068
Rv3059 cytochrome P450 136 cyp136   -0.32978
Rv0272c hypothetical protein   -0.32892
Rv0877 conserved hypothetical protein   -0.32856
Rv3064c conserved membrane protein   -0.32815
Rv0093c conserved membrane protein   -0.32757
Rv1223 serine protease htrA   -0.32696
Rv0311 hypothetical protein   -0.3264
Rv3519 hypothetical protein   -0.32636
Rv2498c citrate (pro-3s)-lyase beta subunit citE   -0.32627
Rv2359 ferric uptake regulation protein furB   -0.32603
Rv1621c transmembrane ATP-binding protein ABC transporter cydD   -0.32588
Rv2849c cob(I)alamin adenosyltransferase cobO   -0.32529
Rv3837c phosphoglycerate mutase   -0.3244
Rv0902c two component system sensor histidine kinase prrB   -0.32431
Rv0937c conserved hypothetical protein   -0.32349
Rv1410c aminoglycosides/tetracycline-transport membrane protein   -0.32288
Rv2501c acetyl-/propionyl-CoA carboxylase alpha subunit accA1   -0.3222
Rv3719 conserved hypothetical protein   -0.32159
Rv3410c inosine-5-monophosphate dehydrogenase guaB3   -0.32149
Rv3087 conserved hypothetical protein   -0.32059
Rv2676c conserved hypothetical protein   -0.3202
Rv1224 hypothetical protein tatB   -0.32011
Rv1246c conserved hypothetical protein   -0.32
Rv3593 lipoprotein lpqF   -0.3199
Rv2618 conserved hypothetical protein   -0.31816
Rv1332 transcriptional regulator   -0.31734
Rv3868 conserved hypothetical protein   -0.31587
Rv3056 DNA-damage-inducible protein P dinP   -0.31581
Rv0262c aminoglycoside 2-N-acetyltransferase aac   -0.31569
Rv2496c pyruvate dehydrogenase E1 component beta subunit pdhB   -0.31517
Rv1419 hypothetical protein   -0.31503
Rv1601 imidazole glycerol-phosphate dehydratase hisB   -0.31413
Rv3627c conserved hypothetical protein   -0.31261
Rv3296 ATP-dependent helicase lhr   -0.31258
Rv2616 conserved hypothetical protein   -0.31209
Rv1086 short-chain Z-isoprenyl diphosphate synthase   -0.31056
Rv0094c conserved hypothetical protein   -0.31011
Rv2659c phiRv2 phage integrase   -0.30979
Rv2237 conserved hypothetical protein   -0.30874
Rv3226c conserved hypothetical protein   -0.30858
Rv3756c osmoprotectant proZ   -0.30772
Rv3876 conserved alanine and proline rich protein   -0.30759
Rv2710 RNA polymerase sigma factor sigB   -0.30757
Rv0875c hypothetical exported protein   -0.3075
Rv2658c phiRv2 phage protein   -0.30716
Rv2111c conserved hypothetical protein   -0.30697
Rv0857 conserved hypothetical protein   -0.3067
Rv1083 conserved hypothetical protein   -0.30649
Rv1084 conserved hypothetical protein   -0.30495
Rv1331 conserved hypothetical protein   -0.30459
Rv1829 conserved hypothetical protein   -0.30377
Rv0938 ATP dependent DNA ligase   -0.30338
Rv1586c phiRv1 integrase   -0.3029
Rv2218 lipoate biosynthesis protein A lipA   -0.30273
Rv3052c hypothetical protein nrdI   -0.30077
Rv2688c antibiotic-transport ATP-binding protein ABC transporter   -0.30017

Genes with positive correlation ?

 Categories Enriched ?: J

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0731c conserved hypothetical protein   0.54617
Rv2950c fatty-acid-CoA ligase fadD29   0.49834
Rv2068c class A beta-lactamase blaC   0.49807
Rv0466 conserved hypothetical protein   0.49554
Rv0438c molybdopterin biosynthesis protein moeA2   0.48747
Rv3803c secreted fibronectin-binding protein antigen protein fbpD   0.48461
Rv2329c nitrite extrusion protein 1 narK1   0.48253
Rv2909c 30S ribosomal protein S16 rpsP   0.48101
Rv0030 hypothetical protein   0.48092
Rv2563 glutamine-transport transmembrane protein ABC transporter   0.47342
Rv0643c methoxy mycolic acid synthase 3 mmaA3   0.47288
Rv1857 molybdate-binding lipoprotein modA   0.47245
Rv3924c 50S ribosomal protein L34 rpmH   0.46388
Rv0715 50S ribosomal protein L24 rplX   0.45644
Rv2275 conserved hypothetical protein   0.45619
Rv3923c ribonuclease P protein component rnpA   0.45579
Rv2114 hypothetical protein   0.45249
Rv0055 30S ribosomal protein rpsR1   0.45139
Rv3922c hemolysin   0.45049
Rv0032 8-amino-7-oxononanoate synthase bioF2   0.4504
Rv0429c polypeptide deformylase def   0.4493
Rv1160 mutator protein mutT   0.44797
Rv2911 D-alanyl-D-alanine carboxypeptidase dacB2   0.44565
Rv0651 50S ribosomal protein L10 rplJ   0.44533
Rv0013 anthranilate synthase component II trpG   0.44514
Rv0026 conserved hypothetical protein   0.44239
Rv2069 RNA polymerase sigma factor sigC   0.44026
Rv0719 50S ribosomal protein L6 rplF   0.43963
Rv2023c hypothetical protein   0.43825
Rv2952 methyltransferase/methylase   0.43773
Rv0948c conserved hypothetical protein   0.43684
Rv0583c lipoprotein lpqN   0.43335
Rv2363 amidase amiA2   0.43093
Rv2741 PE-PGRS family protein   0.43092
Rv0635 conserved hypothetical protein   0.43078
Rv0871 cold shock protein B cspB   0.43058
Rv2959c methyltransferase/methylase   0.4298
Rv0947c mycolyl transferase   0.4291
Rv2120c conserved membrane protein   0.42905
Rv2908c conserved hypothetical protein   0.42739
Rv0652 50S ribosomal protein L7/L12 rplL   0.42719
Rv0713 conserved membrane protein   0.42523
Rv0701 50S ribosomal protein L3 rplC   0.42356
Rv2907c 16S rRNA processing protein rimM   0.42306
Rv3218 conserved hypothetical protein   0.42291
Rv2357c glycyl-tRNA synthetase glyS   0.42208
Rv1980c immunogenic protein mpt64   0.42065
Rv2739c alanine rich transferase   0.4204
Rv0714 50S ribosomal protein L14 rplN   0.42003
Rv2421c nicotinate-nucleotide adenylyltransferase nadD   0.41943
Rv0718 30S ribosomal protein S8 rpsH   0.4185
Rv0891c transcriptional regulator   0.4169
Rv2523c holo-[acyl-carrier protein] synthase acpS   0.41661
Rv0917 glycine betaine transport membrane protein betP   0.41635
Rv0704 50S ribosomal protein L2 rplB   0.41574
Rv0500 pyrroline-5-carboxylate reductase proC   0.41536
Rv0533c 3-oxoacyl-[acyl-carrier-protein] synthase III fabH   0.41495
Rv0056 50S ribosomal protein L9 rplI   0.41439
Rv2387 conserved hypothetical protein   0.41418
Rv0390 conserved hypothetical protein   0.41412
Rv0716 50S ribosomal protein L5 rplE   0.41375
Rv0420c transmembrane protein   0.41358
Rv0231 acyl-CoA dehydrogenase fadE4   0.41352
Rv0683 30S ribosomal protein S7 rpsG   0.41342
Rv0720 50S ribosomal protein L18 rplR   0.41233
Rv0203 hypothetical exported protein   0.41232
Rv0151c PE family protein   0.41219
Rv1523 methyltransferase   0.41156
Rv3747 conserved hypothetical protein   0.40833
Rv0700 30S ribosomal protein S10 rpsJ   0.40692
Rv1379 pyrimidine operon regulatory protein pyrR   0.40543
Rv2434c conserved membrane protein   0.40286
Rv0034 conserved hypothetical protein   0.40157
Rv2999 lipoprotein lppY   0.39889
Rv2201 asparagine synthetase asnB   0.39777
Rv0012 conserved membrane protein   0.39411
Rv0460 conserved hydrophobic protein   0.39366
Rv2067c conserved hypothetical protein   0.3901
Rv0125 serine protease pepA   0.38918
Rv2113 membrane protein   0.38888
Rv1241 conserved hypothetical protein   0.38848
Rv0703 50S ribosomal protein L23 rplW   0.38842
Rv0567 methyltransferase/methylase   0.38779
Rv2072c precorrin-6y methyltransferase cobL   0.38775
Rv3481c membrane protein   0.38669
Rv0418 lipoprotein aminopeptidase lpqL   0.38665
Rv2048c hypothetical protein   0.38614
Rv0669c hydrolase   0.38577
Rv2294 aminotransferase   0.38541
Rv0636 conserved hypothetical protein   0.3848
Rv0054 single-strand binding protein ssb   0.38298
Rv2564 glutamine-transport ATP-binding protein ABC transporter glnQ   0.38291
Rv3575c transcriptional regulator, laci-family   0.38276
Rv0705 30S ribosomal protein S19 rpsS   0.38219
Rv3669 conserved membrane protein   0.37905
Rv1590 conserved hypothetical protein   0.37877
Rv0892 monooxygenase   0.37855
Rv0489 phosphoglycerate mutase 1 gpm1   0.37769
Rv2211c aminomethyltransferase gcvT   0.37768
Rv1400c lipase lipH   0.37703
Rv3686c conserved hypothetical protein   0.37641
Rv0723 50S ribosomal protein L15 rplO   0.37628
Rv2917 conserved alanine and arginine rich protein   0.37519
Rv0545c low affinity inorganic phosphate transporter membrane protein pitA   0.37474
Rv0033 acyl carrier protein acpA   0.37326
Rv3102c cell division ATP-binding protein ftsE   0.3719
Rv0817c hypothetical exported protein   0.37136
Rv2787 conserved alanine rich protein   0.36863
Rv2954c hypothetical protein   0.36836
Rv0707 30S ribosomal protein S3 rpsC   0.3671
Rv1589 biotin synthetase bioB   0.36706
Rv2785c 30S ribosomal protein S15 rpsO   0.36665
Rv3021c PPE family protein   0.36486
Rv1259 conserved hypothetical protein   0.36412
Rv2121c ATP phosphoribosyltransferase hisG   0.36373
Rv1953 conserved hypothetical protein   0.3632
Rv2141c conserved hypothetical protein   0.36318
Rv0237 lipoprotein lpqI   0.36242
Rv0155 NAD(P) transhydrogenase alpha subunit pntAa   0.36182
Rv0009 iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA   0.36111
Rv0317c glycerophosphoryl diester phosphodiesterase glpQ2   0.36105
Rv1111c conserved hypothetical protein   0.36026
Rv2747 transferase   0.35785
Rv1641 initiation factor IF-3 infC   0.35712
Rv0446c conserved membrane protein   0.35705
Rv1591 transmembrane protein   0.35656
Rv2890c 30S ribosomal protein S2 rpsB   0.35201
Rv2768c PPE family protein   0.35102
Rv0482 UDP-N-acetylenolpyruvoylglucosamine reductase murB   0.35073
Rv3726 dehydrogenase   0.35055
Rv3646c DNA topoisomerase I topA   0.34998
Rv0007 conserved membrane protein   0.34981
Rv3011c glutamyl-tRNA(gln) amidotransferase subunit A gatA   0.34942
Rv3739c PPE family protein   0.34938
Rv3442c 30S ribosomal protein S9 rpsI   0.34929
Rv0957 bifunctional purine biosynthesis protein purH   0.3484
Rv3441c phospho-sugar mutase mrsA   0.34835
Rv0717 30S ribosomal protein S14 rpsN1   0.34779
Rv0256c PPE family protein   0.3451
Rv2450c resuscitation-promoting factor rpfE   0.34414
Rv0646c lipase/esterase lipG   0.34397
Rv2805 conserved hypothetical protein   0.34306
Rv2603c conserved hypothetical protein   0.34273
Rv0358 conserved hypothetical protein   0.34029
Rv2948c fatty-acid-CoA ligase fadD22   0.34008
Rv0216 conserved hypothetical protein   0.33881
Rv2889c elongation factor tsf   0.33855
Rv1204c conserved hypothetical protein   0.33838
Rv2001 conserved hypothetical protein   0.33742
Rv1201c transferase   0.33724
Rv0315 beta-1,3-glucanase precursor   0.33681
Rv0942 hypothetical protein   0.33626
Rv1283c oligopeptide-transport membrane protein ABC transporter oppB   0.33503
Rv0053 30S ribosomal protein S6 rpsF   0.3346
Rv1611 indole-3-glycerol phosphate synthase trpC   0.33445
Rv0072 glutamine-transport transmembrane protein ABC transporter   0.33412
Rv1240 malate dehydrogenase mdh   0.33352
Rv0537c membrane protein   0.33326
Rv3797 acyl-CoA dehydrogenase fadE35   0.33293
Rv1644 23S rRNA methyltransferase tsnR   0.3322
Rv0396 hypothetical protein   0.33169
Rv0321 deoxycytidine triphosphate deaminase dcd   0.33148
Rv2843 conserved alanine rich membrane protein   0.33142
Rv1826 glycine cleavage system H protein gcvH   0.33117
Rv3893c PE family protein   0.33097
Rv2904c 50S ribosomal protein L19 rplS   0.33084
Rv2021c transcriptional regulator   0.33032
Rv1202 succinyl-diaminopimelate desuccinylase dapE   0.33017
Rv0732 preprotein translocase secY   0.32956
Rv0867c resuscitation-promoting factor rpfA   0.3294
Rv0308 conserved membrane protein   0.32874
Rv0364 conserved membrane protein   0.32854
Rv0431 tuberculin related peptide   0.32753
Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase aroA   0.32733
Rv3715c recombination protein recR   0.32693
Rv3793 membrane indolylacetylinositol arabinosyltransferase embC   0.32586
Rv3737 conserved membrane protein   0.32542
Rv2698 conserved alanine rich membrane protein   0.32426
Rv0881 rRNA methyltransferase   0.32341
Rv1193 fatty-acid-CoA ligase fadD36   0.32332
Rv2019 hypothetical protein   0.32283
Rv3628 inorganic pyrophosphatase ppa   0.32159
Rv2888c amidase amiC   0.3211
Rv2000 hypothetical protein   0.32103
Rv1856c oxidoreductase   0.32096
Rv0394c secreted protein   0.32071
Rv0322 UDP-glucose 6-dehydrogenase udgA   0.31985
Rv2478c conserved hypothetical protein   0.31967
Rv0935 phosphate-transport membrane ABC transporter pstC1   0.31934
Rv2002 20-beta-hydroxysteroid dehydrogenase fabG3   0.3187
Rv0510 porphobilinogen deaminase hemC   0.31863
Rv2723 conserved membrane protein   0.31812
Rv2949c conserved hypothetical protein   0.31794
Rv2258c transcriptional regulator   0.31744
Rv0506 membrane protein mmpS2   0.31727
Rv0951 succinyl-CoA synthetase beta chain sucC   0.31721
Rv2213 aminopeptidase pepB   0.31622
Rv2445c nucleoside diphosphate kinase ndkA   0.3147
Rv2951c oxidoreductase   0.31459
Rv2956 conserved hypothetical protein   0.31438
Rv0008c membrane protein   0.31352
Rv1683 long-chain acyl-CoA synthase   0.31309
Rv1227c transmembrane protein   0.313
Rv0729 D-xylulose kinase xylB   0.31232
Rv0693 coenzyme pqq synthesis protein E pqqE   0.3108
Rv2929 hypothetical protein   0.31058
Rv0727c L-fuculose phosphate aldolase fucA   0.3104
Rv1205 conserved hypothetical protein   0.31035
Rv1380 aspartate carbamoyltransferase pyrB   0.31009
Rv3443c 50S ribosomal protein L13 rplM   0.30964
Rv3363c conserved hypothetical protein   0.30958
Rv2947c polyketide synthase pks15   0.30939
Rv2190c conserved hypothetical protein   0.30937
Rv1170 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase mshB   0.30915
Rv0010c conserved membrane protein   0.30877
Rv2441c 50S ribosomal protein L27 rpmA   0.30818
Rv0708 50S ribosomal protein L16 rplP   0.30774
Rv0011c conserved membrane protein   0.30752
Rv0057 hypothetical protein   0.30702
Rv3790 oxidoreductase   0.30672
Rv1617 pyruvate kinase pykA   0.30657
Rv1079 cystathionine gamma-synthase metB   0.30652
Rv1191 conserved hypothetical protein   0.3064
Rv1011 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ispE   0.30607
Rv1428c conserved hypothetical protein   0.30582
Rv0361 conserved membrane protein   0.30573
Rv2462c trigger factor protein tig   0.30489
Rv1658 argininosuccinate synthase argG   0.30458
Rv2307c conserved hypothetical protein   0.3044
Rv0899 outer membrane protein A ompA   0.30395
Rv2468c conserved hypothetical protein   0.30363
Rv1689 tyrosyl-tRNA synthase tyrS   0.30352
Rv0933 phosphate-transport ATP-binding protein ABC transporter pstB   0.30335
Rv2440c GTP1/obg-family GTP-binding protein obg   0.30323
Rv0419 lipoprotein peptidase lpqM   0.30236
Rv2857c short-chain type dehydrogenase/reductase   0.3016
Rv0156 NAD(P) transhydrogenase alpha subunit pntAb   0.30107
Rv0226c conserved membrane protein   0.30079
Rv3524 conserved membrane protein   0.30034
Rv1867 conserved hypothetical protein   0.30033