OPERON CORRELATION BROWSER

Explore how genes influence each other’s expression. Each diamond shape represents the correlation in expression for the two genes located at the end of the extended diagonals. Dark red represents the strongest positive correlation. Mouse over the diamonds to see the Pearson correlation coefficient for each gene pair.

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Mycobacterium tuberculosis H37Rv

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Rv3553--Rv3554: -0.0078441 Rv3553--Rv3555c: 0.436 Rv3553--Rv3556c: 0.13104 Rv3553--Rv3557c: 0.21493 Rv3553--Rv3558: -0.10057 Rv3553--Rv3559c: 0.30414 Rv3553--Rv3560c: 0.090317 Rv3553--Rv3561: 0.26117 Rv3553--Rv3562: 0.18634 Rv3553--Rv3563: 0.25273 Rv3553--Rv3564: 0.38405 Rv3553--Rv3565: 0.3923 Rv3553--Rv3566c: 0.17232 Rv3553--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3554--Rv3555c: 0.028045 Rv3554--Rv3556c: 0.28256 Rv3554--Rv3557c: 0.14464 Rv3554--Rv3558: 0.19131 Rv3554--Rv3559c: -0.068826 Rv3554--Rv3560c: 0.15421 Rv3554--Rv3561: 0.052112 Rv3554--Rv3562: 0.18316 Rv3554--Rv3563: 0.17022 Rv3554--Rv3564: 0.13276 Rv3554--Rv3565: 0.0061415 Rv3554--Rv3566c: -0.029894 Rv3554--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3555c--Rv3556c: 0.21632 Rv3555c--Rv3557c: 0.1905 Rv3555c--Rv3558: -0.015979 Rv3555c--Rv3559c: 0.30472 Rv3555c--Rv3560c: 0.16144 Rv3555c--Rv3561: 0.10602 Rv3555c--Rv3562: 0.25181 Rv3555c--Rv3563: 0.22769 Rv3555c--Rv3564: 0.30457 Rv3555c--Rv3565: 0.25201 Rv3555c--Rv3566c: 0.023398 Rv3555c--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3556c--Rv3557c: 0.30595 Rv3556c--Rv3558: 0.32262 Rv3556c--Rv3559c: 0.27804 Rv3556c--Rv3560c: 0.36669 Rv3556c--Rv3561: 0.18222 Rv3556c--Rv3562: 0.49825 Rv3556c--Rv3563: 0.21414 Rv3556c--Rv3564: 0.31873 Rv3556c--Rv3565: -0.0084535 Rv3556c--Rv3566c: 0.0019982 Rv3556c--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3557c--Rv3558: 0.17274 Rv3557c--Rv3559c: 0.19753 Rv3557c--Rv3560c: 0.10729 Rv3557c--Rv3561: 0.18656 Rv3557c--Rv3562: 0.16384 Rv3557c--Rv3563: 0.089761 Rv3557c--Rv3564: 0.12771 Rv3557c--Rv3565: 0.027751 Rv3557c--Rv3566c: -0.037827 Rv3557c--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3558--Rv3559c: 0.084242 Rv3558--Rv3560c: 0.17641 Rv3558--Rv3561: -0.16767 Rv3558--Rv3562: 0.18572 Rv3558--Rv3563: -0.076816 Rv3558--Rv3564: 0.1764 Rv3558--Rv3565: -0.1844 Rv3558--Rv3566c: -0.15217 Rv3558--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3559c--Rv3560c: 0.26963 Rv3559c--Rv3561: 0.21216 Rv3559c--Rv3562: 0.24254 Rv3559c--Rv3563: 0.12098 Rv3559c--Rv3564: 0.39775 Rv3559c--Rv3565: 0.093204 Rv3559c--Rv3566c: -0.10231 Rv3559c--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3560c--Rv3561: 0.24294 Rv3560c--Rv3562: 0.48071 Rv3560c--Rv3563: 0.22803 Rv3560c--Rv3564: 0.30982 Rv3560c--Rv3565: 0.093966 Rv3560c--Rv3566c: 0.20503 Rv3560c--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3561--Rv3562: 0.19628 Rv3561--Rv3563: 0.4258 Rv3561--Rv3564: 0.19233 Rv3561--Rv3565: 0.21151 Rv3561--Rv3566c: 0.22534 Rv3561--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3562--Rv3563: 0.24378 Rv3562--Rv3564: 0.38184 Rv3562--Rv3565: 0.083101 Rv3562--Rv3566c: 0.21378 Rv3562--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3563--Rv3564: 0.3104 Rv3563--Rv3565: 0.1592 Rv3563--Rv3566c: 0.15126 Rv3563--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3564--Rv3565: 0.22635 Rv3564--Rv3566c: -0.0060121 Rv3564--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3565--Rv3566c: 0.15018 Rv3565--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv3566c--Rv3566A: Null (cannot calculate correlation--missing probe(s) on microarray)





Orthologous genes in other genomes:         Orthologs are displayed in the same color; black indicates that no match exists.

Mycobacterium leprae TN

Mycobacterium avium 104

Mycobacterium smegmatis str. MC2155

Rhodococcus sp. RHA1

Streptomyces avermitilis MA-4680