OPERON CORRELATION BROWSER

Explore how genes influence each other’s expression. Each diamond shape represents the correlation in expression for the two genes located at the end of the extended diagonals. Dark red represents the strongest positive correlation. Mouse over the diamonds to see the Pearson correlation coefficient for each gene pair.

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Mycobacterium tuberculosis H37Rv

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Rv2392--Rv2393: 0.80923 Rv2392--Rv2394: 0.58444 Rv2392--Rv2395: 0.076194 Rv2392--Rv2396: -0.12114 Rv2392--Rv2397c: 0.29151 Rv2392--Rv2398c: 0.20356 Rv2392--Rv2399c: 0.28718 Rv2392--Rv2400c: 0.19688 Rv2392--Rv2401: -0.0038806 Rv2392--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2392--Rv2402: 0.18352 Rv2392--Rv2403c: 0.0051767 Rv2392--Rv2404c: 0.25403 Rv2392--Rv2405: 0.030906 Rv2393--Rv2394: 0.5302 Rv2393--Rv2395: 0.25757 Rv2393--Rv2396: -0.14325 Rv2393--Rv2397c: 0.33459 Rv2393--Rv2398c: 0.16253 Rv2393--Rv2399c: 0.35823 Rv2393--Rv2400c: 0.13155 Rv2393--Rv2401: -0.021895 Rv2393--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2393--Rv2402: 0.19983 Rv2393--Rv2403c: -0.0089671 Rv2393--Rv2404c: 0.27568 Rv2393--Rv2405: 0.061692 Rv2394--Rv2395: 0.10995 Rv2394--Rv2396: -0.021888 Rv2394--Rv2397c: 0.28837 Rv2394--Rv2398c: 0.16332 Rv2394--Rv2399c: 0.13245 Rv2394--Rv2400c: 0.089381 Rv2394--Rv2401: 0.038847 Rv2394--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2394--Rv2402: 0.28626 Rv2394--Rv2403c: 0.12754 Rv2394--Rv2404c: 0.4216 Rv2394--Rv2405: 0.011874 Rv2395--Rv2396: -0.080616 Rv2395--Rv2397c: 0.17645 Rv2395--Rv2398c: 0.063024 Rv2395--Rv2399c: 0.17117 Rv2395--Rv2400c: 0.18318 Rv2395--Rv2401: 0.1156 Rv2395--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2395--Rv2402: 0.01797 Rv2395--Rv2403c: 0.072602 Rv2395--Rv2404c: 0.03607 Rv2395--Rv2405: -0.12932 Rv2396--Rv2397c: 0.10744 Rv2396--Rv2398c: 0.22389 Rv2396--Rv2399c: -0.043014 Rv2396--Rv2400c: 0.0070664 Rv2396--Rv2401: 0.097716 Rv2396--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2396--Rv2402: -0.017028 Rv2396--Rv2403c: -0.29271 Rv2396--Rv2404c: -0.10413 Rv2396--Rv2405: 0.11006 Rv2397c--Rv2398c: 0.6513 Rv2397c--Rv2399c: 0.71815 Rv2397c--Rv2400c: 0.57135 Rv2397c--Rv2401: 0.1613 Rv2397c--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2397c--Rv2402: 0.24049 Rv2397c--Rv2403c: -0.11398 Rv2397c--Rv2404c: 0.18456 Rv2397c--Rv2405: 0.074802 Rv2398c--Rv2399c: 0.59374 Rv2398c--Rv2400c: 0.57836 Rv2398c--Rv2401: 0.15434 Rv2398c--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2398c--Rv2402: 0.20893 Rv2398c--Rv2403c: 0.04215 Rv2398c--Rv2404c: 0.15655 Rv2398c--Rv2405: 0.13343 Rv2399c--Rv2400c: 0.58617 Rv2399c--Rv2401: 0.17691 Rv2399c--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2399c--Rv2402: 0.23814 Rv2399c--Rv2403c: 0.065007 Rv2399c--Rv2404c: 0.11938 Rv2399c--Rv2405: 0.025341 Rv2400c--Rv2401: 0.17115 Rv2400c--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2400c--Rv2402: 0.1147 Rv2400c--Rv2403c: 0.1023 Rv2400c--Rv2404c: 0.11386 Rv2400c--Rv2405: -0.032641 Rv2401--Rv2401A: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2401--Rv2402: 0.11635 Rv2401--Rv2403c: 0.097376 Rv2401--Rv2404c: -0.016034 Rv2401--Rv2405: 0.018293 Rv2401A--Rv2402: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2401A--Rv2403c: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2401A--Rv2404c: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2401A--Rv2405: Null (cannot calculate correlation--missing probe(s) on microarray) Rv2402--Rv2403c: 0.24067 Rv2402--Rv2404c: 0.50368 Rv2402--Rv2405: 0.11482 Rv2403c--Rv2404c: 0.17991 Rv2403c--Rv2405: -0.032949 Rv2404c--Rv2405: 0.14802





Orthologous genes in other genomes:         Orthologs are displayed in the same color; black indicates that no match exists.

Mycobacterium leprae TN

Mycobacterium avium 104

Mycobacterium smegmatis str. MC2155

Rhodococcus sp. RHA1

Streptomyces avermitilis MA-4680