Correlation Catalog M. tuberculosis H37Rv: Rv3100c - Ssra-binding protein smpB

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Distribution of gene correlation: Rv3100c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: K

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0275c transcriptional regulator, tetR-family   -0.48012
Rv0885 conserved hypothetical protein   -0.4596
Rv0122 hypothetical protein   -0.44377
Rv0753c methylmalonate-semialdehyde dehydrogenase mmsA   -0.43506
Rv1806 PE family protein   -0.43261
Rv1067c PE-PGRS family protein   -0.42526
Rv2371 PE-PGRS family protein   -0.42498
Rv0335c PE family protein   -0.42265
Rv2358 transcriptional regulator, arsR-family   -0.4223
Rv2631 conserved hypothetical protein   -0.4197
Rv1404 transcriptional regulator   -0.4118
Rv0123 hypothetical protein   -0.40658
Rv2656c phiRv2 phage protein   -0.40621
Rv1807 PPE family protein   -0.4033
Rv1150 transposase   -0.40163
Rv0841c   -0.39932
Rv2827c hypothetical protein   -0.39917
Rv2729c conserved alanine, valine and leucine rich membrane protein   -0.3989
Rv2516c hypothetical protein   -0.39646
Rv1628c conserved hypothetical protein   -0.39599
Rv1929c conserved hypothetical protein   -0.39586
Rv2034 arsR-type repressor protein   -0.39509
Rv0596c conserved hypothetical protein   -0.39353
Rv1169c PE family protein   -0.39251
Rv3337 conserved hypothetical protein   -0.39053
Rv3423c alanine racemase alr   -0.39017
Rv0887c conserved hypothetical protein   -0.38966
Rv1221 alternative RNA polymerase sigma factor sigE   -0.38864
Rv1808 PPE family protein   -0.38807
Rv3340 O-acetylhomoserine sulfhydrylase metC   -0.38771
Rv2304c hypothetical protein   -0.38769
Rv2517c hypothetical protein   -0.3856
Rv2638 conserved hypothetical protein   -0.3854
Rv2777c conserved hypothetical protein   -0.3846
Rv1535 hypothetical protein   -0.38437
Rv0340 conserved hypothetical protein   -0.38261
Rv0331 dehydrogenase/reductase   -0.38126
Rv2662 hypothetical protein   -0.3811
Rv3546 acetyl-CoA acetyltransferase fadA5   -0.37969
Rv3061c acyl-CoA dehydrogenase fadE22   -0.37771
Rv2660c hypothetical protein   -0.37652
Rv1960c conserved hypothetical protein   -0.37587
Rv3862c transcriptional regulator whiB-like whiB6   -0.37545
Rv3503c ferredoxin fdxD   -0.37479
Rv1750c fatty-acid-CoA ligase fadD1   -0.373
Rv2098c PE-PGRS family protein   -0.37286
Rv2663 hypothetical protein   -0.37217
Rv0327c cytochrome P450 135A1 cyp135A1   -0.36963
Rv0579 conserved hypothetical protein   -0.36938
Rv0232 transcriptional regulator, tetR/acrR-family   -0.36913
Rv3367 PE-PGRS family protein   -0.36793
Rv3504 acyl-CoA dehydrogenase fadE26   -0.36785
Rv0328 transcriptional regulator, tetR/acrR-family   -0.36549
Rv2653c phiRv2 phage protein   -0.36515
Rv0476 conserved membrane protein   -0.36417
Rv3269 conserved hypothetical protein   -0.3637
Rv2645 hypothetical protein   -0.36322
Rv3595c PE-PGRS family protein   -0.36299
Rv2650c phiRv2 phage protein   -0.36274
Rv2714 conserved alanine and leucine rich protein   -0.35915
Rv0415 thiamine biosynthesis oxidoreductase thiO   -0.35897
Rv0834c PE-PGRS family protein   -0.3589
Rv3180c hypothetical alanine rich protein   -0.35885
Rv1468c PE-PGRS family protein   -0.35657
Rv1365c anti-anti-sigma factor rsfA   -0.35656
Rv1243c PE-PGRS family protein   -0.35652
Rv1325c PE-PGRS family protein   -0.35612
Rv0008c membrane protein   -0.35604
Rv0612 conserved hypothetical protein   -0.35602
Rv2878c soluble secreted antigen mpt53 precursor   -0.35516
Rv2630 hypothetical protein   -0.35479
Rv2035 conserved hypothetical protein   -0.35445
Rv3338 conserved hypothetical protein   -0.35414
Rv0654 dioxygenase   -0.35406
Rv3182 conserved hypothetical protein   -0.35374
Rv1403c methyltransferase   -0.35306
Rv0675 enoyl-CoA hydratase echA5   -0.35211
Rv0244c acyl-CoA dehydrogenase fadE5   -0.35164
Rv0068 oxidoreductase   -0.35078
Rv0330c hypothetical protein   -0.35062
Rv0325 hypothetical protein   -0.34997
Rv0047c conserved hypothetical protein   -0.34933
Rv2022c conserved hypothetical protein   -0.34781
Rv1091 PE-PGRS family protein   -0.34658
Rv3452 cutinase precursor cut4   -0.34526
Rv3385c conserved hypothetical protein   -0.34414
Rv0767c conserved hypothetical protein   -0.34398
Rv1285 sulfate adenylyltransferase subunit 2 cysD   -0.34283
Rv1143 alpha-methylacyl-CoA racemase mcr   -0.34266
Rv2651c phiRv2 phage protease   -0.34111
Rv0946c glucose-6-phosphate isomerase pgi   -0.34063
Rv2016 hypothetical protein   -0.34032
Rv1840c PE-PGRS family protein   -0.34
Rv2657c phiRv2 phage protein   -0.3394
Rv0571c conserved hypothetical protein   -0.33789
Rv1775 conserved hypothetical protein   -0.33608
Rv3230c oxidoreductase   -0.33594
Rv3016 lipoprotein lpqA   -0.33571
Rv1894c conserved hypothetical protein   -0.33496
Rv1087 PE-PGRS family protein   -0.33488
Rv2640c transcriptional regulator, arsR-family   -0.33461
Rv1577c phiRv1 phage protein   -0.33452
Rv2669 conserved hypothetical protein   -0.33415
Rv1647 conserved hypothetical protein   -0.33377
Rv2887 transcriptional regulator   -0.33312
Rv0574c conserved hypothetical protein   -0.33279
Rv2664 hypothetical protein   -0.33225
Rv3183 transcriptional regulator   -0.33214
Rv3188 conserved hypothetical protein   -0.33204
Rv2688c antibiotic-transport ATP-binding protein ABC transporter   -0.33203
Rv3603c conserved alanine and leucine rich protein   -0.33121
Rv2628 hypothetical protein   -0.33096
Rv0477 conserved secreted protein   -0.33085
Rv2249c glycerol-3-phosphate dehydrogenase glpD1   -0.33041
Rv1168c PPE family protein   -0.33039
Rv2606c pyridoxine biosynthesis protein   -0.32989
Rv1364c conserved hypothetical protein   -0.32944
Rv2749 conserved hypothetical protein   -0.32941
Rv1057 conserved hypothetical protein   -0.32935
Rv0886 NADPH:adrenodoxin oxidoreductase fprB   -0.3293
Rv1993c conserved hypothetical protein   -0.32859
Rv1141c enoyl-CoA hydratase echA11   -0.32822
Rv1990c transcriptional regulator   -0.3275
Rv2865 conserved hypothetical protein   -0.32749
Rv2472 conserved hypothetical protein   -0.32661
Rv2182c 1-acylglycerol-3-phosphate o-acyltransferase   -0.32646
Rv3917c chromosome partitioning protein parB   -0.32571
Rv0467 isocitrate lyase icl   -0.32569
Rv3406 dioxygenase   -0.32446
Rv2655c phiRv2 phage protein   -0.32425
Rv3743c cation transporter P-type ATPase ctpJ   -0.3237
Rv1194c conserved hypothetical protein   -0.32327
Rv3334 transcriptional regulator, merR-family   -0.32243
Rv2661c hypothetical protein   -0.3212
Rv1800 PPE family protein   -0.32066
Rv3832c conserved hypothetical protein   -0.31998
Rv3426 PPE family protein   -0.31961
Rv2853 PE-PGRS family protein   -0.3192
Rv1820 acetolactate synthase ilvG   -0.31918
Rv1389 guanylate kinase gmk   -0.31907
Rv3659c conserved hypothetical protein   -0.31889
Rv3391 acyl-CoA reductase acrA1   -0.31862
Rv1733c conserved membrane protein   -0.31822
Rv3429 PPE family protein   -0.31787
Rv0656c conserved hypothetical protein   -0.31767
Rv2025c conserved membrane protein   -0.31711
Rv1671 membrane protein   -0.31672
Rv1395 transcriptional regulator   -0.31641
Rv1532c conserved hypothetical protein   -0.31626
Rv3405c transcriptional regulator   -0.31607
Rv3746c PE family protein   -0.3149
Rv2667 ATP-dependent protease ATP-binding subunit clpC2   -0.31459
Rv1789 PPE family protein   -0.31429
Rv2212 conserved hypothetical protein   -0.31342
Rv1989c hypothetical protein   -0.31286
Rv0475 iron-regulated heparin binding hemagglutinin hbhA   -0.31267
Rv2030c conserved hypothetical protein   -0.31261
Rv0595c conserved hypothetical protein   -0.31228
Rv1375 conserved hypothetical protein   -0.31178
Rv1450c PE-PGRS family protein   -0.31133
Rv0570 ribonucleoside-diphosphate reductase large subunit nrdZ   -0.31072
Rv2643 arsenic-transport membrane protein arsC   -0.31071
Rv3507 PE-PGRS family protein   -0.3106
Rv0117 oxidative stress response regulatory protein oxyS   -0.3106
Rv2623 conserved hypothetical protein   -0.31056
Rv1660 chalcone synthase pks10   -0.31047
Rv0369c membrane oxidoreductase   -0.30989
Rv2639c conserved membrane protein   -0.30957
Rv1189 alternative RNA polymerase sigma factor sigI   -0.30808
Rv1154c hypothetical protein   -0.30775
Rv3617 epoxide hydrolase ephA   -0.30752
Rv0197 oxidoreductase   -0.30747
Rv0485 transcriptional regulator   -0.30681
Rv1227c transmembrane protein   -0.30666
Rv3123 hypothetical protein   -0.30651
Rv0324 transcriptional regulator, arsR-family   -0.30635
Rv0307c hypothetical protein   -0.30634
Rv0474 transcriptional regulator   -0.30602
Rv1088 PE family protein   -0.30582
Rv0245 oxidoreductase   -0.30526
Rv0572c hypothetical protein   -0.3052
Rv1986 conserved membrane protein   -0.30445
Rv1636 iron-regulated conserved hypothetical protein   -0.30438
Rv2122c phosphoribosyl-AMP pyrophosphatase hisE   -0.30406
Rv3399 conserved hypothetical protein   -0.30376
Rv2004c conserved hypothetical protein   -0.30358
Rv0268c hypothetical protein   -0.30342
Rv0274 conserved hypothetical protein   -0.30319
Rv3597c iron-regulated lsr2 protein precursor   -0.30292
Rv1041c transposase   -0.30163
Rv2624c conserved hypothetical protein   -0.30157
Rv1187 pyrroline-5-carboxylate dehydrogenase rocA   -0.30104
Rv1000   -0.30045
Rv1804c conserved hypothetical protein   -0.30026
Rv0807 conserved hypothetical protein   -0.3002

Genes with positive correlation ?

 Categories Enriched ?: C

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv3282 conserved hypothetical protein   0.51922
Rv3148 NADH dehydrogenase I chain D nuoD   0.49189
Rv3200c transmembrane cation transporter   0.48549
Rv3146 NADH dehydrogenase I chain B nuoB   0.4719
Rv3032 transferase   0.46928
Rv3152 NADH dehydrogenase I chain H nuoH   0.46669
Rv0178 MCE-associated membrane protein   0.45771
Rv3078 hydroxylaminobenzene mutase hab   0.45328
Rv3193c conserved membrane protein   0.4463
Rv3150 NADH dehydrogenase I chain F nuoF   0.44195
Rv3215 isochorismate synthase entC   0.4387
Rv1547 DNA polymerase III alpha chain dnaE1   0.43688
Rv1614 prolipoprotein diacylglyceryl transferases lgt   0.43406
Rv3051c ribonucleoside-diphosphate reductase alpha chain nrdE   0.43093
Rv3318 succinate dehydrogenase flavoprotein subunit sdhA   0.42889
Rv3153 NADH dehydrogenase I chain I nuoI   0.4287
Rv1304 ATP synthase A chain atpB   0.42683
Rv2476c NAD-dependent glutamate dehydrogenase gdh   0.42639
Rv3103c hypothetical proline rich protein   0.42488
Rv1612 tryptophan synthase, beta subunit trpB   0.42426
Rv3156 NADH dehydrogenase I chain L nuoL   0.42305
Rv3284 conserved hypothetical protein   0.42267
Rv3262 F420 biosynthesis protein fbiB   0.42111
Rv1703c catechol-O-methyltransferase   0.42029
Rv0050 bifunctional penicillin-binding protein ponA1   0.41889
Rv3147 NADH dehydrogenase I chain C nuoC   0.41743
Rv2102 conserved hypothetical protein   0.41743
Rv0172 MCE-family protein mce1D   0.41623
Rv1307 ATP synthase delta chain atpH   0.41532
Rv1309 ATP synthase gamma chain atpG   0.41163
Rv3791 short-chain type dehydrogenase/reductase   0.40919
Rv2475c conserved hypothetical protein   0.40704
Rv0177 MCE-associated protein   0.40694
Rv0171 MCE-family protein mce1C   0.40606
Rv3244c lipoprotein lpqB   0.40595
Rv1306 ATP synthase B chain atpF   0.40333
Rv3498c MCE-family protein mce4B   0.40324
Rv1280c periplasmic oligopeptide-binding lipoprotein oppA   0.4011
Rv3149 NADH dehydrogenase I chain E nuoE   0.40103
Rv3264c D-alpha-D-mannose-1-phosphate guanylyltransferase manB   0.40085
Rv0169 MCE-family protein mce1A   0.40019
Rv0168 hypothetical membrane protein yrbE1B   0.39959
Rv3104c conserved membrane protein   0.39895
Rv0337c aspartate aminotransferase aspC   0.39704
Rv1281c oligopeptide-transport ATP-binding protein ABC transporter oppD   0.39525
Rv1310 ATP synthase beta chain atpD   0.39486
Rv0170 MCE-family protein mce1B   0.39457
Rv0176 MCE-associated transmembrane protein   0.39283
Rv3216 acetyltransferase   0.39102
Rv2992c glutamyl-tRNA synthetase gltS   0.39052
Rv3154 NADH dehydrogenase I chain J nuoJ   0.38993
Rv3361c conserved hypothetical protein   0.38911
Rv0408 phosphate acetyltransferase pta   0.38861
Rv1618 acyl-CoA thioesterase II tesB1   0.3883
Rv3464 dTDP-glucose 4,6-dehydratase rmlB   0.38456
Rv3496c MCE-family protein mce4D   0.38325
Rv3319 succinate dehydrogenase iron-sulphur protein subunit sdhB   0.38293
Rv3158 NADH dehydrogenase I chain N nuoN   0.38194
Rv2128 conserved membrane protein   0.3817
Rv3690 conserved membrane protein   0.38109
Rv3151 NADH dehydrogenase I chain G nuoG   0.37879
Rv1312 conserved secreted protein   0.37789
Rv3624c hypoxanthine-guanine phosphoribosyltransferase hpt   0.37783
Rv1438 triosephosphate isomerase tpi   0.37564
Rv3255c mannose-6-phosphate isomerase manA   0.37506
Rv0444c conserved hypothetical protein   0.37436
Rv3120 conserved hypothetical protein   0.3741
Rv3155 NADH dehydrogenase I chain K nuoK   0.37263
Rv0778 cytochrome P450 126 cyp126   0.37263
Rv2604c conserved hypothetical protein   0.36988
Rv1689 tyrosyl-tRNA synthase tyrS   0.36979
Rv1836c conserved hypothetical protein   0.3694
Rv0014c transmembrane serine/threonine-protein kinase B pknB   0.36937
Rv1070c enoyl-CoA hydratase echA8   0.36869
Rv3190c hypothetical protein   0.36627
Rv1445c 6-phosphogluconolactonase devB   0.36568
Rv3283 thiosulfate sulfurtransferase sseA   0.36555
Rv3042c phosphoserine phosphatase serB2   0.36417
Rv2127 L-asparagine permease ansP1   0.36414
Rv3044 Fe(III)-dicitrate-binding periplasmic lipoprotein fecB   0.3634
Rv3320c conserved hypothetical protein   0.36291
Rv0058 replicative DNA helicase dnaB   0.36244
Rv2750 dehydrogenase   0.36163
Rv2882c ribosome recycling factor frr   0.3604
Rv0404 fatty-acid-CoA ligase fadD30   0.3602
Rv3281 conserved hypothetical protein   0.35813
Rv3676 transcriptional regulator, crp/fnr-family   0.35706
Rv0868c molybdenum cofactor biosynthesis protein D 2 moaD2   0.35683
Rv3606c 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK   0.35525
Rv3224 iron-regulated short-chain dehydrogenase/reductase   0.35453
Rv1097c glycine and proline rich membrane protein   0.35342
Rv1311 ATP synthase epsilon chain atpC   0.35329
Rv0247c succinate dehydrogenase iron-sulfur subunit   0.35321
Rv2855 NADPH-dependent mycothiol reductase mtr   0.35259
Rv3438 conserved hypothetical protein   0.35257
Rv3121 cytochrome P450 141 cyp141   0.35084
Rv2427c gamma-glutamyl phosphate reductase protein proA   0.34949
Rv3632 conserved membrane protein   0.34896
Rv2046 lipoprotein lppI   0.34848
Rv0174 MCE-family protein mce1F   0.34828
Rv1447c glucose-6-phosphate 1-dehydrogenase zwf2   0.34722
Rv0421c conserved hypothetical protein   0.34321
Rv1728c conserved hypothetical protein   0.34308
Rv0479c conserved membrane protein   0.34207
Rv0006 DNA gyrase subunit A gyrA   0.34187
Rv0734 methionine aminopeptidase mapA   0.34083
Rv0173 MCE-family lipoprotein mce1E   0.33971
Rv3272 conserved hypothetical protein   0.3396
Rv0346c L-asparagine permease ansP2   0.33915
Rv2482c glycerol-3-phosphate acyltransferase plsB2   0.3385
Rv3720 fatty-acid synthase   0.33716
Rv2257c conserved hypothetical protein   0.33658
Rv3781 O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter rfbE   0.33637
Rv2822c hypothetical protein   0.33616
Rv1308 ATP synthase alpha chain atpA   0.33586
Rv0051 conserved membrane protein   0.33463
Rv1446c oxpp cycle protein opcA   0.33451
Rv1916 isocitrate lyase aceAb   0.3344
Rv1677 lipoprotein dsbF   0.33227
Rv1305 ATP synthase C chain atpE   0.33196
Rv0225 conserved hypothetical protein   0.33187
Rv1835c conserved hypothetical protein   0.33064
Rv3144c PPE family protein   0.32942
Rv0126 trehalose synthase treS   0.32865
Rv1610 conserved membrane protein   0.32851
Rv2457c ATP-dependent clp protease ATP-binding subunit clpX   0.32815
Rv3045 NADP-dependent alcohol dehydrogenase adhC   0.32778
Rv0292 conserved membrane protein   0.3277
Rv3305c N-acyl-L-amino acid amidohydrolase amiA1   0.32756
Rv3322c methyltransferase   0.32673
Rv1770 conserved hypothetical protein   0.32631
Rv0036c conserved hypothetical protein   0.32595
Rv1274 lipoprotein lprB   0.32444
Rv1771 oxidoreductase   0.32342
Rv2752c conserved hypothetical protein   0.32338
Rv3680 anion transporter ATPase   0.32327
Rv2680 conserved hypothetical protein   0.32243
Rv0433 conserved hypothetical protein   0.32155
Rv1798 conserved hypothetical protein   0.32155
Rv1334 conserved hypothetical protein   0.32096
Rv0200 conserved membrane protein   0.32058
Rv3794 membrane indolylacetylinositol arabinosyltransferase embA   0.32014
Rv0798c 29 kda antigen cfp29   0.31904
Rv2568c conserved hypothetical protein   0.31883
Rv1233c conserved membrane protein   0.31859
Rv1502 hypothetical protein   0.3183
Rv1275 lipoprotein lprC   0.31823
Rv3577 conserved hypothetical protein   0.31761
Rv1747 conserved transmembrane ATP-binding protein ABC transporter   0.31724
Rv3868 conserved hypothetical protein   0.3172
Rv2196 ubiquinol-cytochrome C reductase qcrB cytochrome B subunit   0.31665
Rv3291c transcriptional regulator, asnC-family   0.31538
Rv1426c esterase lipO   0.31491
Rv1708 initiation inhibitor protein   0.31488
Rv2836c DNA-damage-inducible protein F dinF   0.31471
Rv2238c peroxiredoxin ahpE   0.31392
Rv2139 dihydroorotate dehydrogenase pyrD   0.31381
Rv3780 conserved hypothetical protein   0.31342
Rv1884c resuscitation-promoting factor rpfC   0.31224
Rv0542c O-succinylbenzoic acid-CoA ligase menE   0.31194
Rv0936 phosphate-transport membrane ABC transporter pstA2   0.31181
Rv3495c MCE-family lipoprotein mce4E   0.31171
Rv0655 ribonucleotide-transport ATP-binding protein ABC transporter mkl   0.31169
Rv2572c aspartyl-tRNA synthetase aspS   0.31139
Rv0934 periplasmic phosphate-binding lipoprotein pstS1   0.31115
Rv2092c ATP-dependent DNA helicase helY   0.3111
Rv1335 9.5 kda culture filtrate antigen cfp10a   0.31084
Rv1824 conserved membrane protein   0.31054
Rv3372 trehalose-6-phosphate phosphatase otsB2   0.31021
Rv0503c cyclopropane-fatty-acyl-phospholipid synthase 2 cmaA2   0.30961
Rv3706c conserved proline rich protein   0.30952
Rv3040c conserved hypothetical protein   0.30914
Rv1166 lipoprotein lpqW   0.30828
Rv0822c conserved hypothetical protein   0.3077
Rv3308 phosphomannomutase pmmB   0.30711
Rv3708c aspartate-semialdehyde dehydrogenase asd   0.30623
Rv1606 phosphoribosyl-AMP-1,6-cyclohydrolase hisI   0.3059
Rv3494c MCE-family protein mce4F   0.30577
Rv0783c multidrug resistance membrane efflux protein emrB   0.30566
Rv2928 thioesterase tesA   0.30529
Rv2753c dihydrodipicolinate synthase dapA   0.30506
Rv1676 hypothetical protein   0.30476
Rv0227c conserved membrane protein   0.30421
Rv3101c cell division protein ftsX   0.30398
Rv2404c GTP-binding protein lepA   0.30364
Rv2409c conserved hypothetical protein   0.30361
Rv3256c conserved hypothetical protein   0.30325
Rv3321c conserved hypothetical protein   0.30277
Rv1564c maltooligosyltrehalose synthase treX   0.30259
Rv2881c membrane phosphatidate cytidylyltransferase cdsA   0.30208
Rv2460c ATP-dependent clp protease proteolytic subunit 2 clpP2   0.30158
Rv3800c polyketide synthase pks13   0.30088
Rv2994 conserved membrane protein   0.30066
Rv2214c short-chain type dehydrogenase ephD   0.30048