Correlation Catalog M. tuberculosis H37Rv: Rv3062 - ATP-dependent DNA ligase ligB

<< Rv3061c
Rv3063 >>
Click on the question marks for explanations Hide help
Distribution of gene correlation: Rv3062 vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: C

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2457c ATP-dependent clp protease ATP-binding subunit clpX   -0.42905
Rv2199c conserved membrane protein   -0.40033
Rv2195 Rieske iron-sulfur protein qcrA   -0.39696
Rv3799c propionyl-CoA carboxylase beta chain 4 accD4   -0.39463
Rv2194 ubiquinol-cytochrome C reductase qcrC cytochrome C subunit   -0.39252
Rv1477 invasion-associated protein   -0.39162
Rv2061c conserved hypothetical protein   -0.39045
Rv1437 phosphoglycerate kinase pgk   -0.39036
Rv2855 NADPH-dependent mycothiol reductase mtr   -0.38505
Rv2196 ubiquinol-cytochrome C reductase qcrB cytochrome B subunit   -0.38186
Rv0503c cyclopropane-fatty-acyl-phospholipid synthase 2 cmaA2   -0.3797
Rv0014c transmembrane serine/threonine-protein kinase B pknB   -0.37693
Rv1703c catechol-O-methyltransferase   -0.37327
Rv3283 thiosulfate sulfurtransferase sseA   -0.37062
Rv2753c dihydrodipicolinate synthase dapA   -0.37059
Rv1305 ATP synthase C chain atpE   -0.36914
Rv1311 ATP synthase epsilon chain atpC   -0.36825
Rv1304 ATP synthase A chain atpB   -0.36692
Rv3413c hypothetical alanine and proline rich protein   -0.36664
Rv2455c oxidoreductase alpha subunit   -0.3635
Rv1871c conserved hypothetical protein   -0.36349
Rv1341 conserved hypothetical protein   -0.36289
Rv1411c lipoprotein lprG   -0.35451
Rv1307 ATP synthase delta chain atpH   -0.35404
Rv0337c aspartate aminotransferase aspC   -0.35229
Rv1306 ATP synthase B chain atpF   -0.35202
Rv3043c cytochrome C oxidase polypeptide I ctaD   -0.35195
Rv1784 conserved hypothetical protein   -0.35182
Rv3284 conserved hypothetical protein   -0.35099
Rv1107c exodeoxyribonuclease VII small subunit xseB   -0.3499
Rv2752c conserved hypothetical protein   -0.34989
Rv1677 lipoprotein dsbF   -0.34897
Rv1173 F420 biosynthesis protein fbiC   -0.34737
Rv1449c transketolase tkt   -0.34729
Rv1923 lipase lipD   -0.34681
Rv1447c glucose-6-phosphate 1-dehydrogenase zwf2   -0.34388
Rv0472c transcriptional regulator, tetR-family   -0.34362
Rv2348c hypothetical protein   -0.3427
Rv1770 conserved hypothetical protein   -0.34247
Rv3281 conserved hypothetical protein   -0.34237
Rv2574 conserved hypothetical protein   -0.34148
Rv3592 conserved hypothetical protein   -0.34074
Rv2476c NAD-dependent glutamate dehydrogenase gdh   -0.33868
Rv3877 conserved membrane protein   -0.33863
Rv0644c methoxy mycolic acid synthase 2 mmaA2   -0.33658
Rv2427c gamma-glutamyl phosphate reductase protein proA   -0.33496
Rv2259 zinc-type alcohol dehydrogenase adhE2   -0.33446
Rv1078 proline-rich antigen pra   -0.33434
Rv2215 pyruvate dehydrogenase E2 component sucB   -0.33421
Rv0632c enoyl-CoA hydratase echA3   -0.33349
Rv0470c mycolic acid synthase pcaA   -0.33321
Rv2733c conserved alanine and arginine rich protein   -0.33161
Rv2453c molybdopterin-guanine dinucleotide biosynthesis protein A mobA   -0.32877
Rv1771 oxidoreductase   -0.32876
Rv0733 adenylate kinase adk   -0.32849
Rv0287 esat-6 like protein esxG   -0.32675
Rv2051c polyprenol-monophosphomannose synthase ppm1   -0.32544
Rv2241 pyruvate dehydrogenase E1 component aceE   -0.32526
Rv2200c transmembrane cytochrome C oxidase subunit II ctaC   -0.32494
Rv0760c conserved hypothetical protein   -0.3238
Rv1608c peroxidoxin bcpB   -0.3231
Rv2773c dihydrodipicolinate reductase dapB   -0.32234
Rv1438 triosephosphate isomerase tpi   -0.32209
Rv2376c low molecular weight protein antigen cfp2   -0.32179
Rv1099c conserved hypothetical protein   -0.32148
Rv3119 molybdenum cofactor biosynthesis protein E moaE1   -0.32088
Rv1987 chitinase   -0.31911
Rv0509 glutamyl-tRNA reductase hemA   -0.31901
Rv1872c L-lactate dehydrogenase lldD2   -0.31864
Rv0379 protein transport protein secE2   -0.31857
Rv0432 periplasmic superoxide dismutase sodC   -0.31804
Rv1309 ATP synthase gamma chain atpG   -0.31791
Rv0455c conserved hypothetical protein   -0.31783
Rv2245 3-oxoacyl-[acyl-carrier protein] synthase 1 kasA   -0.31761
Rv1333 hydrolase   -0.31722
Rv1308 ATP synthase alpha chain atpA   -0.31623
Rv1323 acetyl-CoA acetyltransferase fadA4   -0.31601
Rv2447c folylpolyglutamate synthase protein folC   -0.31487
Rv3887c conserved membrane protein   -0.31462
Rv1830 conserved hypothetical protein   -0.31382
Rv1079 cystathionine gamma-synthase metB   -0.31357
Rv3717 conserved hypothetical protein   -0.31327
Rv0778 cytochrome P450 126 cyp126   -0.31312
Rv2475c conserved hypothetical protein   -0.31287
Rv3285 bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain accA3   -0.31207
Rv2343c DNA primase dnaG   -0.31132
Rv3020c Esat-6 like protein esxS   -0.31071
Rv1615 hypothetical membrane protein   -0.30968
Rv1109c conserved hypothetical protein   -0.30962
Rv1038c Esat-6 like protein esxJ   -0.30805
Rv3215 isochorismate synthase entC   -0.30709
Rv3496c MCE-family protein mce4D   -0.30654
Rv2454c oxidoreductase beta subunit   -0.30644
Rv2721c conserved alanine and glycine rich membrane protein   -0.30632
Rv3692 methanol dehydrogenase transcriptional regulator moxR2   -0.30579
Rv3853 S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG   -0.30565
Rv3835 conserved membrane protein   -0.30362
Rv3708c aspartate-semialdehyde dehydrogenase asd   -0.30357
Rv0831c conserved hypothetical protein   -0.30342
Rv1410c aminoglycosides/tetracycline-transport membrane protein   -0.30281
Rv3884c cbxX/cfqX family protein   -0.30211
Rv0247c succinate dehydrogenase iron-sulfur subunit   -0.3012
Rv0501 UDP-glucose 4-epimerase galE2   -0.30052
Rv0207c conserved hypothetical protein   -0.30028

Genes with positive correlation ?

 Categories Enriched ?: K S

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2662 hypothetical protein   0.63722
Rv2650c phiRv2 phage protein   0.56861
Rv0840c proline iminopeptidase pip   0.55254
Rv0841c   0.53802
Rv2034 arsR-type repressor protein   0.53433
Rv1929c conserved hypothetical protein   0.53093
Rv3182 conserved hypothetical protein   0.52363
Rv2656c phiRv2 phage protein   0.52312
Rv2655c phiRv2 phage protein   0.51344
Rv2664 hypothetical protein   0.51236
Rv3180c hypothetical alanine rich protein   0.50639
Rv0767c conserved hypothetical protein   0.50599
Rv3183 transcriptional regulator   0.5041
Rv3424c hypothetical protein   0.50109
Rv2651c phiRv2 phage protease   0.49643
Rv1577c phiRv1 phage protein   0.49557
Rv2076c hypothetical protein   0.49022
Rv2827c hypothetical protein   0.48956
Rv3746c PE family protein   0.48563
Rv2669 conserved hypothetical protein   0.482
Rv2016 hypothetical protein   0.48077
Rv2660c hypothetical protein   0.47527
Rv2666 transposase   0.47297
Rv2517c hypothetical protein   0.46918
Rv2035 conserved hypothetical protein   0.46856
Rv2644c hypothetical protein   0.46834
Rv2663 hypothetical protein   0.46804
Rv3334 transcriptional regulator, merR-family   0.46033
Rv2516c hypothetical protein   0.45344
Rv3176c epoxide hydrolase mesT   0.45285
Rv0182c alternative RNA polymerase sigma factor sigG   0.44786
Rv3384c conserved hypothetical protein   0.4424
Rv2022c conserved hypothetical protein   0.44204
Rv2036 conserved hypothetical protein   0.43803
Rv3428c transposase   0.42894
Rv3340 O-acetylhomoserine sulfhydrylase metC   0.42888
Rv0750 conserved hypothetical protein   0.42755
Rv3832c conserved hypothetical protein   0.42667
Rv3188 conserved hypothetical protein   0.42308
Rv2642 transcriptional regulator, arsR-family   0.42277
Rv3745c conserved hypothetical protein   0.42232
Rv2306c   0.42143
Rv3018c PPE family protein   0.42067
Rv1956 transcriptional regulator   0.41934
Rv1528c polyketide synthase associated protein papA4   0.419
Rv0946c glucose-6-phosphate isomerase pgi   0.41842
Rv0232 transcriptional regulator, tetR/acrR-family   0.41796
Rv2878c soluble secreted antigen mpt53 precursor   0.41694
Rv3066 transcriptional regulator, deoR-family   0.41465
Rv2665 hypothetical arginine rich protein   0.4127
Rv1992c metal cation transporting P-type ATPase ctpG   0.41057
Rv0887c conserved hypothetical protein   0.4099
Rv2014 transposase   0.40586
Rv1910c hypothetical exported protein   0.40424
Rv1990c transcriptional regulator   0.40352
Rv3204 DNA-methyltransferase   0.40133
Rv3917c chromosome partitioning protein parB   0.40114
Rv1375 conserved hypothetical protein   0.39825
Rv3862c transcriptional regulator whiB-like whiB6   0.3973
Rv0333 hypothetical protein   0.39468
Rv1955 hypothetical protein   0.39467
Rv0384c endopeptidase ATP binding protein chain B clpB   0.39445
Rv3124 transcriptional regulator   0.39372
Rv2075c hypothetical exported protein   0.39298
Rv2631 conserved hypothetical protein   0.3922
Rv2254c membrane protein   0.39114
Rv2012 conserved hypothetical protein   0.39063
Rv0275c transcriptional regulator, tetR-family   0.38884
Rv2652c phiRv2 phage protein   0.38843
Rv1961 hypothetical protein   0.38769
Rv1394c cytochrome P450 132 cyp132   0.38761
Rv3844 transposase   0.38747
Rv0766c cytochrome P450 123 cyp123   0.38353
Rv0574c conserved hypothetical protein   0.38332
Rv1874 hypothetical protein   0.38238
Rv0186 beta-glucosidase bglS   0.38143
Rv1989c hypothetical protein   0.37792
Rv1994c transcriptional regulator   0.37661
Rv3061c acyl-CoA dehydrogenase fadE22   0.37544
Rv2667 ATP-dependent protease ATP-binding subunit clpC2   0.37544
Rv2647 hypothetical protein   0.37267
Rv2472 conserved hypothetical protein   0.37226
Rv1986 conserved membrane protein   0.3708
Rv2323c conserved hypothetical protein   0.36948
Rv1991c conserved hypothetical protein   0.36947
Rv3385c conserved hypothetical protein   0.36544
Rv1993c conserved hypothetical protein   0.36452
Rv1285 sulfate adenylyltransferase subunit 2 cysD   0.36423
Rv3122 hypothetical protein   0.3639
Rv2887 transcriptional regulator   0.36384
Rv0618 galactose-1-phosphate uridylyltransferase galTa   0.36361
Rv1314c conserved hypothetical protein   0.3625
Rv2638 conserved hypothetical protein   0.36218
Rv1960c conserved hypothetical protein   0.36186
Rv2122c phosphoribosyl-AMP pyrophosphatase hisE   0.35897
Rv0742 PE-PGRS family protein   0.35731
Rv1041c transposase   0.35725
Rv2017 transcriptional regulator   0.35709
Rv2099c PE family protein   0.35561
Rv3123 hypothetical protein   0.35535
Rv2098c PE-PGRS family protein   0.35499
Rv2641 cadmium inducible protein cadI   0.3537
Rv1405c methyltransferase   0.3531
Rv0090 membrane protein   0.35125
Rv1985c transcriptional regulator, lysR-family   0.35115
Rv1356c hypothetical protein   0.35054
Rv0846c oxidase   0.34995
Rv3426 PPE family protein   0.34939
Rv2332 NAD-dependent malate oxidoreductase mez   0.34932
Rv0279c PE-PGRS family protein   0.349
Rv1187 pyrroline-5-carboxylate dehydrogenase rocA   0.34753
Rv2009 conserved hypothetical protein   0.34731
Rv3189 conserved hypothetical protein   0.34718
Rv2657c phiRv2 phage protein   0.3469
Rv3047c hypothetical protein   0.34573
Rv3658c conserved membrane protein   0.34453
Rv2639c conserved membrane protein   0.34307
Rv0753c methylmalonate-semialdehyde dehydrogenase mmsA   0.34133
Rv2104c conserved hypothetical protein   0.34014
Rv1150 transposase   0.33996
Rv3054c conserved hypothetical protein   0.33985
Rv1088 PE family protein   0.33951
Rv1806 PE family protein   0.3388
Rv2814c transposase   0.33836
Rv3397c phytoene synthase phyA   0.33813
Rv0331 dehydrogenase/reductase   0.33698
Rv0302 transcriptional regulator, tetR/acrR-family   0.3352
Rv1572c conserved hypothetical protein   0.33388
Rv2990c hypothetical protein   0.33292
Rv3454 conserved membrane protein   0.33246
Rv3833 transcriptional regulator, araC-family   0.33207
Rv0122 hypothetical protein   0.33168
Rv1715 3-hydroxybutyryl-CoA dehydrogenase fadB3   0.33126
Rv2793c tRNA pseudouridine synthase B truB   0.3303
Rv1001 arginine deiminase arcA   0.33002
Rv3425 PPE family protein   0.33001
Rv2688c antibiotic-transport ATP-binding protein ABC transporter   0.3296
Rv1574 phiRv1 phage protein   0.32874
Rv2826c hypothetical protein   0.32796
Rv0837c hypothetical protein   0.32775
Rv3348 transposase   0.32769
Rv0570 ribonucleoside-diphosphate reductase large subunit nrdZ   0.32724
Rv0268c hypothetical protein   0.32562
Rv0195 two component system transcriptional regulator, luxR-family   0.3249
Rv0793 conserved hypothetical protein   0.32309
Rv3126c hypothetical protein   0.32245
Rv0324 transcriptional regulator, arsR-family   0.3223
Rv3125c PPE family protein   0.32142
Rv0596c conserved hypothetical protein   0.32045
Rv2274c hypothetical protein   0.3199
Rv3660c conserved hypothetical protein   0.31943
Rv2255c hypothetical protein   0.31915
Rv1450c PE-PGRS family protein   0.31887
Rv2865 conserved hypothetical protein   0.31863
Rv3064c conserved membrane protein   0.31785
Rv2824c hypothetical protein   0.31766
Rv1146 transmembrane transport protein mmpL13b   0.31739
Rv3192 conserved alanine and proline rich protein   0.31722
Rv1847 conserved hypothetical protein   0.3157
Rv2142c hypothetical protein   0.31457
Rv1988 methyltransferase   0.31391
Rv0008c membrane protein   0.31297
Rv0340 conserved hypothetical protein   0.31289
Rv3429 PPE family protein   0.31257
Rv2661c hypothetical protein   0.31202
Rv3098c hypothetical protein   0.312
Rv3536c hydratase   0.31172
Rv0026 conserved hypothetical protein   0.31088
Rv2835c sn-glycerol-3-phosphate transport membrane protein ABC transporter ugpA   0.30936
Rv0196 transcriptional regulator   0.30774
Rv0921 resolvase   0.3069
Rv1395 transcriptional regulator   0.30531
Rv1404 transcriptional regulator   0.30497
Rv3674c endonuclease III nth   0.30496
Rv0123 hypothetical protein   0.30492
Rv2504c succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit scoA   0.30463
Rv1897c conserved hypothetical protein   0.30454
Rv2830c conserved hypothetical protein   0.3045
Rv3738c PPE family protein   0.3041
Rv1376 conserved hypothetical protein   0.30359
Rv0586 transcriptional regulator, gntR-family   0.30263
Rv1750c fatty-acid-CoA ligase fadD1   0.30215
Rv3173c transcriptional regulator, tetR/acrR-family   0.30213
Rv0834c PE-PGRS family protein   0.30201
Rv3380c transposase   0.30049