Correlation Catalog M. tuberculosis H37Rv: Rv2389c - resuscitation-promoting factor rpfD

<< Rv2388c
Rv2390c >>
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Distribution of gene correlation: Rv2389c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: J

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv1240 malate dehydrogenase mdh   -0.40265
Rv1379 pyrimidine operon regulatory protein pyrR   -0.39749
Rv1386 PE family protein   -0.39083
Rv2468c conserved hypothetical protein   -0.38641
Rv3276c phosphoribosylaminoimidazole carboxylase ATPase subunit purK   -0.38329
Rv2952 methyltransferase/methylase   -0.38168
Rv2888c amidase amiC   -0.37285
Rv3224 iron-regulated short-chain dehydrogenase/reductase   -0.37275
Rv2238c peroxiredoxin ahpE   -0.37194
Rv0732 preprotein translocase secY   -0.36948
Rv3628 inorganic pyrophosphatase ppa   -0.36909
Rv3803c secreted fibronectin-binding protein antigen protein fbpD   -0.36517
Rv2890c 30S ribosomal protein S2 rpsB   -0.36293
Rv1590 conserved hypothetical protein   -0.36245
Rv2739c alanine rich transferase   -0.36149
Rv2156c phospho-N-acetylmuramoyl-pentappeptidetransferase murX   -0.36083
Rv0636 conserved hypothetical protein   -0.36014
Rv0718 30S ribosomal protein S8 rpsH   -0.35958
Rv2068c class A beta-lactamase blaC   -0.35953
Rv2462c trigger factor protein tig   -0.35601
Rv3747 conserved hypothetical protein   -0.35596
Rv2883c uridylate kinase pyrH   -0.35429
Rv0651 50S ribosomal protein L10 rplJ   -0.35414
Rv1650 phenylalanyl-tRNA synthetase beta chain pheT   -0.3529
Rv0705 30S ribosomal protein S19 rpsS   -0.34891
Rv0704 50S ribosomal protein L2 rplB   -0.34716
Rv0546c conserved hypothetical protein   -0.34644
Rv0702 50S ribosomal protein L4 rplD   -0.34594
Rv0715 50S ribosomal protein L24 rplX   -0.34584
Rv0058 replicative DNA helicase dnaB   -0.34538
Rv0652 50S ribosomal protein L7/L12 rplL   -0.34499
Rv0871 cold shock protein B cspB   -0.34469
Rv0701 50S ribosomal protein L3 rplC   -0.34387
Rv0714 50S ribosomal protein L14 rplN   -0.34383
Rv0700 30S ribosomal protein S10 rpsJ   -0.34337
Rv3922c hemolysin   -0.34266
Rv0545c low affinity inorganic phosphate transporter membrane protein pitA   -0.34256
Rv0683 30S ribosomal protein S7 rpsG   -0.34253
Rv0720 50S ribosomal protein L18 rplR   -0.34253
Rv2069 RNA polymerase sigma factor sigC   -0.34227
Rv3031 conserved hypothetical protein   -0.34127
Rv3021c PPE family protein   -0.34038
Rv0703 50S ribosomal protein L23 rplW   -0.33931
Rv0708 50S ribosomal protein L16 rplP   -0.3346
Rv3029c electron transfer flavoprotein beta subunit fixA   -0.33424
Rv0444c conserved hypothetical protein   -0.33397
Rv3418c 10 kda chaperonin groES   -0.33391
Rv0156 NAD(P) transhydrogenase alpha subunit pntAb   -0.33368
Rv3598c lysyl-tRNA synthetase 1 lysS   -0.33284
Rv1241 conserved hypothetical protein   -0.33099
Rv2211c aminomethyltransferase gcvT   -0.33013
Rv1098c fumarase fum   -0.32996
Rv0719 50S ribosomal protein L6 rplF   -0.32993
Rv2412 30S ribosomal protein S20 rpsT   -0.32928
Rv0009 iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA   -0.32875
Rv2190c conserved hypothetical protein   -0.32627
Rv1242 conserved hypothetical protein   -0.32595
Rv1614 prolipoprotein diacylglyceryl transferases lgt   -0.32591
Rv0440 60 kda chaperonin 2 groEL2   -0.32484
Rv1078 proline-rich antigen pra   -0.32392
Rv0562 polyprenyl-diphosphate synthase grcC1   -0.32333
Rv2363 amidase amiA2   -0.32203
Rv0418 lipoprotein aminopeptidase lpqL   -0.32152
Rv3234c conserved hypothetical protein   -0.3204
Rv3442c 30S ribosomal protein S9 rpsI   -0.31928
Rv0500 pyrroline-5-carboxylate reductase proC   -0.31858
Rv3011c glutamyl-tRNA(gln) amidotransferase subunit A gatA   -0.31709
Rv3396c GMP synthase guaA   -0.31693
Rv2844 conserved alanine rich protein   -0.31659
Rv2114 hypothetical protein   -0.31596
Rv0177 MCE-associated protein   -0.31568
Rv0460 conserved hydrophobic protein   -0.31537
Rv0954 conserved membrane protein   -0.31481
Rv1523 methyltransferase   -0.31379
Rv2564 glutamine-transport ATP-binding protein ABC transporter glnQ   -0.31316
Rv3646c DNA topoisomerase I topA   -0.3124
Rv0431 tuberculin related peptide   -0.3107
Rv1860 alanine and proline rich secreted protein apa   -0.31056
Rv0200 conserved membrane protein   -0.31008
Rv0684 elongation factor G fusA1   -0.30896
Rv0430 conserved hypothetical protein   -0.30747
Rv3102c cell division ATP-binding protein ftsE   -0.30637
Rv1303 conserved membrane protein   -0.30629
Rv1826 glycine cleavage system H protein gcvH   -0.30596
Rv2736c regulatory protein recX   -0.30583
Rv1111c conserved hypothetical protein   -0.30552
Rv0056 50S ribosomal protein L9 rplI   -0.30502
Rv2120c conserved membrane protein   -0.30408
Rv3678c conserved hypothetical protein   -0.3025
Rv3078 hydroxylaminobenzene mutase hab   -0.30247
Rv3686c conserved hypothetical protein   -0.30084

Genes with positive correlation ?

 Categories Enriched ?: None

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2390c conserved hypothetical protein   0.68608
Rv1405c methyltransferase   0.52171
Rv2115c ATPase   0.49951
Rv0981 mycobacterial persistence regulator mprA   0.43336
Rv2941 fatty-acid-CoA ligase fadD28   0.42207
Rv1056 conserved hypothetical protein   0.41596
Rv1403c methyltransferase   0.41353
Rv1027c transcriptional regulator kdpE   0.39809
Rv0835 lipoprotein lpqQ   0.38533
Rv0937c conserved hypothetical protein   0.38464
Rv3749c conserved hypothetical protein   0.38264
Rv3519 hypothetical protein   0.38014
Rv2359 ferric uptake regulation protein furB   0.37793
Rv1419 hypothetical protein   0.37752
Rv3064c conserved membrane protein   0.36656
Rv2345 conserved membrane protein   0.36639
Rv1829 conserved hypothetical protein   0.36568
Rv3241c conserved hypothetical protein   0.36418
Rv0233 ribonucleoside-diphosphate reductase beta chain nrdB   0.3637
Rv3865 conserved hypothetical protein   0.36283
Rv1221 alternative RNA polymerase sigma factor sigE   0.35948
Rv0065 conserved hypothetical protein   0.3594
Rv2500c acyl-CoA dehydrogenase fadE19   0.35794
Rv3746c PE family protein   0.35159
Rv0262c aminoglycoside 2-N-acetyltransferase aac   0.35066
Rv1625c membrane-anchored adenylyl cyclase cya   0.34904
Rv3065 multidrugs transport membrane protein mmr   0.34794
Rv2711 iron-dependent repressor and activator ideR   0.34637
Rv3863 hypothetical alanine rich protein   0.34493
Rv2369c hypothetical protein   0.34446
Rv3881c conserved alanine and glycine rich protein   0.34316
Rv2686c antibiotic-transport membrane leucine and alanine and valine rich protein ABC transporter   0.34316
Rv2005c conserved hypothetical protein   0.34029
Rv3197 ABC transporter ATP-binding protein   0.34006
Rv2688c antibiotic-transport ATP-binding protein ABC transporter   0.33909
Rv0426c transmembrane protein   0.33743
Rv2816c conserved hypothetical protein   0.33498
Rv2925c ribonuclease III rnc   0.33473
Rv1239c magnesium and cobalt transport transmembrane protein corA   0.32889
Rv1404 transcriptional regulator   0.32888
Rv1791 PE family protein   0.32842
Rv3615c conserved hypothetical protein   0.32602
Rv0997 hypothetical protein   0.32366
Rv0399c lipoprotein lpqK   0.32139
Rv3767c conserved hypothetical protein   0.32034
Rv0307c hypothetical protein   0.32003
Rv2029c phosphofructokinase pfkB   0.31917
Rv1893 conserved hypothetical protein   0.31563
Rv0939 bifunctional 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/cyclase/dehydrase   0.31549
Rv3133c two component system transcriptional regulator devR   0.31534
Rv1351 hypothetical protein   0.3138
Rv3327 transposase   0.31366
Rv3699 conserved hypothetical protein   0.31221
Rv3614c conserved hypothetical protein   0.31218
Rv2025c conserved membrane protein   0.31132
Rv2501c acetyl-/propionyl-CoA carboxylase alpha subunit accA1   0.30833
Rv2709 conserved membrane protein   0.30773
Rv2091c membrane protein   0.30626
Rv1181 polyketide beta-ketoacyl synthase pks4   0.30512
Rv2708c conserved hypothetical protein   0.30436
Rv1057 conserved hypothetical protein   0.30379
Rv2920c ammonium-transport membrane protein amt   0.30306
Rv1331 conserved hypothetical protein   0.30286
Rv3287c anti-sigma factor rsbW   0.30243
Rv3007c oxidoreductase   0.30006