Correlation Catalog M. tuberculosis H37Rv: Rv1028c - sensor protein kdpD

<< Rv1027c
Rv1029 >>
Click on the question marks for explanations Hide help
Distribution of gene correlation: Rv1028c vs. all genes ?
COG Categories ?

Information storage and processing

J Translation, ribosomal structure and biogenesis

K Transcription

I DNA replication, recombination and repair

Cellular Processes

D Cell division and chromosome partitioning

O Posttranslational modification, protein turnover, chaperones

M Cell envelope biogenesis, outer membrane

N Cell motility and secretion

P Inorganic transport and metabolism

T Signal transduction mechanisms

Metabolism

C Energy production and conversion

G Carbohydrate transport and metabolism

E Amino acid transport and metabolism

F Nucleotide transport and metabolism

H Coenzyme metabolism

I Lipid metabolism

Q Secondary metabolites biosynthesis, transport and catabolism

Poorly characterized

R General function predicton only

S Unknown function

X No COG assigned

Genes with negative correlation ?

 Categories Enriched ?: J C

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv0155 NAD(P) transhydrogenase alpha subunit pntAa   -0.43425
Rv0315 beta-1,3-glucanase precursor   -0.42788
Rv2257c conserved hypothetical protein   -0.42661
Rv0774c hypothetical exported protein   -0.4244
Rv1559 threonine dehydratase ilvA   -0.42175
Rv0247c succinate dehydrogenase iron-sulfur subunit   -0.41809
Rv0157 NAD(P) transhydrogenase beta subunit pntB   -0.41615
Rv2861c methionine aminopeptidase mapB   -0.40882
Rv0164 conserved hypothetical protein   -0.39849
Rv2102 conserved hypothetical protein   -0.39528
Rv0227c conserved membrane protein   -0.39303
Rv1078 proline-rich antigen pra   -0.39052
Rv3791 short-chain type dehydrogenase/reductase   -0.38964
Rv1311 ATP synthase epsilon chain atpC   -0.38925
Rv3799c propionyl-CoA carboxylase beta chain 4 accD4   -0.38787
Rv0432 periplasmic superoxide dismutase sodC   -0.38694
Rv2953 conserved hypothetical protein   -0.38607
Rv2468c conserved hypothetical protein   -0.38416
Rv1617 pyruvate kinase pykA   -0.38349
Rv0642c methoxy mycolic acid synthase 4 mmaA4   -0.38247
Rv0613c hypothetical protein   -0.37924
Rv1612 tryptophan synthase, beta subunit trpB   -0.37701
Rv1611 indole-3-glycerol phosphate synthase trpC   -0.37693
Rv0722 50S ribosomal protein L30 rpmD   -0.37361
Rv1079 cystathionine gamma-synthase metB   -0.37326
Rv3584 lipoprotein lpqE   -0.37271
Rv0760c conserved hypothetical protein   -0.37118
Rv3119 molybdenum cofactor biosynthesis protein E moaE1   -0.3696
Rv0503c cyclopropane-fatty-acyl-phospholipid synthase 2 cmaA2   -0.36956
Rv2951c oxidoreductase   -0.36824
Rv0636 conserved hypothetical protein   -0.36761
Rv2245 3-oxoacyl-[acyl-carrier protein] synthase 1 kasA   -0.36688
Rv2376c low molecular weight protein antigen cfp2   -0.36648
Rv1309 ATP synthase gamma chain atpG   -0.36635
Rv3030 conserved hypothetical protein   -0.36592
Rv3029c electron transfer flavoprotein beta subunit fixA   -0.36549
Rv1233c conserved membrane protein   -0.36541
Rv0009 iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA   -0.36536
Rv1099c conserved hypothetical protein   -0.36486
Rv3780 conserved hypothetical protein   -0.36459
Rv2412 30S ribosomal protein S20 rpsT   -0.36135
Rv3274c acyl-CoA dehydrogenase fadE25   -0.35865
Rv2238c peroxiredoxin ahpE   -0.35862
Rv3011c glutamyl-tRNA(gln) amidotransferase subunit A gatA   -0.35842
Rv0183 lysophospholipase   -0.35836
Rv2564 glutamine-transport ATP-binding protein ABC transporter glnQ   -0.35815
Rv1305 ATP synthase C chain atpE   -0.35769
Rv0156 NAD(P) transhydrogenase alpha subunit pntAb   -0.35557
Rv2453c molybdopterin-guanine dinucleotide biosynthesis protein A mobA   -0.35532
Rv1307 ATP synthase delta chain atpH   -0.35484
Rv1111c conserved hypothetical protein   -0.35468
Rv0632c enoyl-CoA hydratase echA3   -0.3544
Rv1310 ATP synthase beta chain atpD   -0.35431
Rv0685 iron-regulated elongation factor tu tuf   -0.35411
Rv1306 ATP synthase B chain atpF   -0.35394
Rv0934 periplasmic phosphate-binding lipoprotein pstS1   -0.35318
Rv2603c conserved hypothetical protein   -0.35306
Rv0637 conserved hypothetical protein   -0.35271
Rv2445c nucleoside diphosphate kinase ndkA   -0.35238
Rv1241 conserved hypothetical protein   -0.35237
Rv2220 glutamine synthetase glnA1   -0.35109
Rv0822c conserved hypothetical protein   -0.34857
Rv0721 30S ribosomal protein S5 rpsE   -0.34805
Rv2954c hypothetical protein   -0.3476
Rv3215 isochorismate synthase entC   -0.34537
Rv0717 30S ribosomal protein S14 rpsN1   -0.34513
Rv0716 50S ribosomal protein L5 rplE   -0.34504
Rv2246 3-oxoacyl-[acyl-carrier protein] synthase 2 kasB   -0.34474
Rv0167 hypothetical membrane protein yrbE1A   -0.34436
Rv1596 nicotinate-nucleotide pyrophosphatase nadC   -0.34411
Rv2970c lipase/esterase lipN   -0.34405
Rv2981c D-alanine-D-alanine ligase ddlA   -0.34399
Rv2247 acetyl/propionyl-CoA carboxylase beta subunit accD6   -0.34386
Rv3149 NADH dehydrogenase I chain E nuoE   -0.34347
Rv3281 conserved hypothetical protein   -0.34225
Rv2859c amidotransferase   -0.3412
Rv0178 MCE-associated membrane protein   -0.3407
Rv0652 50S ribosomal protein L7/L12 rplL   -0.34048
Rv2845c prolyl-tRNA synthetase proS   -0.34025
Rv2195 Rieske iron-sulfur protein qcrA   -0.33848
Rv1308 ATP synthase alpha chain atpA   -0.33726
Rv1023 enolase eno   -0.3371
Rv0709 50S ribosomal protein L29 rpmC   -0.33485
Rv2703 RNA polymerase sigma factor sigA   -0.3343
Rv2244 meromycolate extension acyl carrier protein acpM   -0.33429
Rv1304 ATP synthase A chain atpB   -0.33406
Rv2243 malonyl CoA-acyl carrier protein transacylase fabD   -0.3338
Rv1608c peroxidoxin bcpB   -0.33336
Rv3631 transferase   -0.3325
Rv0248c succinate dehydrogenase iron-sulfur subunit   -0.33227
Rv2881c membrane phosphatidate cytidylyltransferase cdsA   -0.33057
Rv1387 PPE family protein   -0.33038
Rv0871 cold shock protein B cspB   -0.33018
Rv0056 50S ribosomal protein L9 rplI   -0.32959
Rv2462c trigger factor protein tig   -0.32845
Rv3794 membrane indolylacetylinositol arabinosyltransferase embA   -0.32833
Rv1630 30S ribosomal protein S1 rpsA   -0.3281
Rv3722c conserved hypothetical protein   -0.32782
Rv1689 tyrosyl-tRNA synthase tyrS   -0.32704
Rv0337c aspartate aminotransferase aspC   -0.32696
Rv0925c conserved hypothetical protein   -0.3269
Rv3032 transferase   -0.3245
Rv3365c conserved hypothetical protein   -0.32411
Rv1172c PE family protein   -0.32384
Rv1449c transketolase tkt   -0.32348
Rv2524c fatty-acid synthase fas   -0.32331
Rv2611c acyltransferase   -0.32317
Rv3285 bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain accA3   -0.32241
Rv0177 MCE-associated protein   -0.32182
Rv0761c zinc-type alcohol dehydrogenase NAD dependent adhB   -0.3216
Rv2213 aminopeptidase pepB   -0.3214
Rv3277 conserved membrane protein   -0.32101
Rv2908c conserved hypothetical protein   -0.32086
Rv1590 conserved hypothetical protein   -0.32
Rv3363c conserved hypothetical protein   -0.31983
Rv0715 50S ribosomal protein L24 rplX   -0.31968
Rv2971 oxidoreductase   -0.3182
Rv0479c conserved membrane protein   -0.31633
Rv0718 30S ribosomal protein S8 rpsH   -0.31624
Rv1830 conserved hypothetical protein   -0.31614
Rv0683 30S ribosomal protein S7 rpsG   -0.31524
Rv0433 conserved hypothetical protein   -0.31481
Rv3915 hydrolase   -0.31479
Rv3224 iron-regulated short-chain dehydrogenase/reductase   -0.31389
Rv0684 elongation factor G fusA1   -0.3137
Rv0933 phosphate-transport ATP-binding protein ABC transporter pstB   -0.31352
Rv3031 conserved hypothetical protein   -0.31315
Rv2200c transmembrane cytochrome C oxidase subunit II ctaC   -0.31215
Rv2613c conserved hypothetical protein   -0.31212
Rv3801c fatty-acid-CoA ligase fadD32   -0.31099
Rv1547 DNA polymerase III alpha chain dnaE1   -0.31094
Rv2952 methyltransferase/methylase   -0.31032
Rv2051c polyprenol-monophosphomannose synthase ppm1   -0.30998
Rv2199c conserved membrane protein   -0.30991
Rv0719 50S ribosomal protein L6 rplF   -0.30927
Rv0732 preprotein translocase secY   -0.30867
Rv0954 conserved membrane protein   -0.30847
Rv0651 50S ribosomal protein L10 rplJ   -0.30833
Rv0430 conserved hypothetical protein   -0.30817
Rv0169 MCE-family protein mce1A   -0.30753
Rv2231c aminotransferase cobC   -0.30743
Rv1097c glycine and proline rich membrane protein   -0.3072
Rv2785c 30S ribosomal protein S15 rpsO   -0.30633
Rv0723 50S ribosomal protein L15 rplO   -0.30594
Rv0867c resuscitation-promoting factor rpfA   -0.30579
Rv3458c 30S ribosomal protein S4 rpsD   -0.30505
Rv2140c conserved hypothetical protein   -0.30499
Rv1208 conserved hypothetical protein   -0.30477
Rv2457c ATP-dependent clp protease ATP-binding subunit clpX   -0.30473
Rv2477c macrolide-transport ATP-binding protein ABC transporter   -0.30457
Rv3499c MCE-family protein mce4A   -0.30388
Rv0710 30S ribosomal protein S17 rpsQ   -0.30377
Rv3648c cold shock protein A cspA   -0.30371
Rv0172 MCE-family protein mce1D   -0.30334
Rv0379 protein transport protein secE2   -0.30267
Rv0733 adenylate kinase adk   -0.30226
Rv3800c polyketide synthase pks13   -0.30194
Rv3686c conserved hypothetical protein   -0.30184
Rv1703c catechol-O-methyltransferase   -0.30178
Rv1613 tryptophan synthase, alpha subunit trpA   -0.30177
Rv1677 lipoprotein dsbF   -0.30017

Genes with positive correlation ?

 Categories Enriched ?: K

Gene ?DescriptionLinks ?COG ?Correlation ?
Rv2631 conserved hypothetical protein   0.4654
Rv0834c PE-PGRS family protein   0.44725
Rv2827c hypothetical protein   0.44424
Rv0122 hypothetical protein   0.44345
Rv1152 transcriptional regulator   0.43185
Rv0275c transcriptional regulator, tetR-family   0.42043
Rv1356c hypothetical protein   0.41218
Rv2638 conserved hypothetical protein   0.41184
Rv3182 conserved hypothetical protein   0.40603
Rv1001 arginine deiminase arcA   0.40306
Rv2816c conserved hypothetical protein   0.40205
Rv0872c PE-PGRS family protein   0.39864
Rv0579 conserved hypothetical protein   0.39643
Rv0274 conserved hypothetical protein   0.39519
Rv0750 conserved hypothetical protein   0.38923
Rv2660c hypothetical protein   0.38902
Rv0116c conserved membrane protein   0.38889
Rv2358 transcriptional regulator, arsR-family   0.3874
Rv0767c conserved hypothetical protein   0.38703
Rv2517c hypothetical protein   0.38669
Rv1750c fatty-acid-CoA ligase fadD1   0.38662
Rv1285 sulfate adenylyltransferase subunit 2 cysD   0.38543
Rv0232 transcriptional regulator, tetR/acrR-family   0.3848
Rv0946c glucose-6-phosphate isomerase pgi   0.38225
Rv0753c methylmalonate-semialdehyde dehydrogenase mmsA   0.38221
Rv3288c hypothetical protein usfY   0.38158
Rv0212c asnC-family transcriptional regulator nadR   0.37645
Rv3290c L-lysine-epsilon aminotransferase lat   0.37637
Rv0570 ribonucleoside-diphosphate reductase large subunit nrdZ   0.37557
Rv3917c chromosome partitioning protein parB   0.37278
Rv2557 conserved hypothetical protein   0.37128
Rv3746c PE family protein   0.37101
Rv0325 hypothetical protein   0.37071
Rv3180c hypothetical alanine rich protein   0.37054
Rv1804c conserved hypothetical protein   0.36957
Rv2516c hypothetical protein   0.3682
Rv1056 conserved hypothetical protein   0.36727
Rv2498c citrate (pro-3s)-lyase beta subunit citE   0.36552
Rv2688c antibiotic-transport ATP-binding protein ABC transporter   0.36482
Rv0123 hypothetical protein   0.36389
Rv0214 fatty-acid-CoA ligase fadD4   0.36319
Rv2504c succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit scoA   0.36306
Rv0628c conserved hypothetical protein   0.36241
Rv0340 conserved hypothetical protein   0.36133
Rv1358 transcriptional regulator   0.35978
Rv1150 transposase   0.35913
Rv2034 arsR-type repressor protein   0.35875
Rv3334 transcriptional regulator, merR-family   0.35809
Rv3188 conserved hypothetical protein   0.35455
Rv1044 conserved hypothetical protein   0.34959
Rv1468c PE-PGRS family protein   0.34914
Rv1986 conserved membrane protein   0.34895
Rv0807 conserved hypothetical protein   0.34879
Rv3176c epoxide hydrolase mesT   0.3473
Rv2656c phiRv2 phage protein   0.34633
Rv3348 transposase   0.34616
Rv1404 transcriptional regulator   0.34526
Rv2323c conserved hypothetical protein   0.34458
Rv0596c conserved hypothetical protein   0.34431
Rv1888c transmembrane protein   0.34386
Rv0898c conserved hypothetical protein   0.34256
Rv0747 PE-PGRS family protein   0.34193
Rv0612 conserved hypothetical protein   0.34038
Rv2436 ribokinase rbsK   0.33981
Rv1450c PE-PGRS family protein   0.3376
Rv2497c pyruvate dehydrogenase E1 component alpha subunit pdhA   0.33719
Rv2266 cytochrome P450 124 cyp124   0.33618
Rv0064 conserved membrane protein   0.33522
Rv2664 hypothetical protein   0.33496
Rv1831 hypothetical protein   0.33328
Rv2035 conserved hypothetical protein   0.33317
Rv2322c ornithine aminotransferase rocD1   0.33267
Rv0328 transcriptional regulator, tetR/acrR-family   0.33168
Rv1088 PE family protein   0.33118
Rv0124 PE-PGRS family protein   0.33116
Rv1588c 13E12 repeat family protein   0.33049
Rv2865 conserved hypothetical protein   0.32991
Rv3844 transposase   0.32867
Rv1808 PPE family protein   0.32762
Rv1806 PE family protein   0.32741
Rv3429 PPE family protein   0.32506
Rv3503c ferredoxin fdxD   0.32503
Rv2506 transcriptional regulator, tetR-family   0.32499
Rv0333 hypothetical protein   0.32477
Rv0575c oxidoreductase   0.32467
Rv2651c phiRv2 phage protease   0.32451
Rv1314c conserved hypothetical protein   0.32366
Rv1577c phiRv1 phage protein   0.32283
Rv3287c anti-sigma factor rsbW   0.32269
Rv2657c phiRv2 phage protein   0.32242
Rv2650c phiRv2 phage protein   0.32241
Rv1528c polyketide synthase associated protein papA4   0.3222
Rv1552 fumarate reductase flavoprotein subunit frdA   0.32158
Rv3642c hypothetical protein   0.32139
Rv0574c conserved hypothetical protein   0.32074
Rv1267c transcriptional regulator embR   0.31995
Rv3270 metal cation transporting P-type ATPase ctpC   0.31847
Rv2076c hypothetical protein   0.31795
Rv3016 lipoprotein lpqA   0.31678
Rv2662 hypothetical protein   0.31539
Rv1929c conserved hypothetical protein   0.3151
Rv2663 hypothetical protein   0.31493
Rv1736c nitrate reductase narX   0.31393
Rv2077c conserved membrane protein   0.31369
Rv1740 conserved hypothetical protein   0.31355
Rv3466 conserved hypothetical protein   0.31311
Rv2830c conserved hypothetical protein   0.31307
Rv2926c conserved hypothetical protein   0.31096
Rv0264c conserved hypothetical protein   0.30837
Rv0874c conserved hypothetical protein   0.30823
Rv2098c PE-PGRS family protein   0.30812
Rv1000   0.30777
Rv2332 NAD-dependent malate oxidoreductase mez   0.30772
Rv1032c two component system sensor histidine kinase trcS   0.30729
Rv3183 transcriptional regulator   0.30644
Rv2644c hypothetical protein   0.30554
Rv0132c F420-dependent glucose-6-phosphate dehydrogenase fgd2   0.30292
Rv1910c hypothetical exported protein   0.30272
Rv3122 hypothetical protein   0.30257
Rv3173c transcriptional regulator, tetR/acrR-family   0.30253
Rv0857 conserved hypothetical protein   0.3014
Rv0550c hypothetical protein   0.30075